Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1513 ATGGAACCCAGAAGCAGCATAGAGCTGAAACTCATTTCGTGCAAAGACCTCAGAGCCTTCAACTTCTTTCAAAAACTCACCGTTTACGCGCTCGTCTTCATCGCCAGTGATGATCCCACCAGAGACCTAACGGAGGAACAGAAGCAACAGCAGAAAACCCAAACAGATAGAGAAAGCGACGACGACGGTAGCAACCCCGAATGGAACCACGAAGCGCGTTTCGATCTGGAATGCTTCTCGCAACGCGGTTTCGCCGACCTCTTCTTCCGCTTCGAGTTCCGACACGACGGTGTCATCCTCGGCGACAAGCTCCTCGGAGAGTGTCGCGTTTCCATCGCCGATCTGCTCCGTGACGTCCCCGACGTCGCCAGATTCGTGAGTTACGAGGTTCGTGCCGCTGATGGCAAGCCCAACGGGATCTTCAATTTCTCGTACAAATTGAACGGGTTTGGGACCCACTCGTCACAGATTCTCGACGGGAGAATCTCTGGGTACCCTGTTCTGGCTCCGGATGATTGTTCTCCGAACACATCGCAGGTACGAATACAATATCCAACGTCGGAAATCGCGAACTCATATTGCTACCCGACGGCTGCTTTGCCAGTGGCTTCTGCTGTTTATTCTCCCGCGGTTGCACCGCCTCCGCCGGTTTTGTTTCCGCCGTCCGGAGAGTGTCATTATTGTTACCCTCCGCCGCCGGCGCGTCCATACCCTCCCCCGCCTCCTCCGGCGGTGCAATATTACGTACCTTTTCGGCCTGTGGCCCATCCCTGGCCACCAGGCCCGTATTTTGAACACAGGTGGTAG 807 0.5539 MEPRSSIELKLISCKDLRAFNFFQKLTVYALVFIASDDPTRDLTEEQKQQQKTQTDRESDDDGSNPEWNHEARFDLECFSQRGFADLFFRFEFRHDGVILGDKLLGECRVSIADLLRDVPDVARFVSYEVRAADGKPNGIFNFSYKLNGFGTHSSQILDGRISGYPVLAPDDCSPNTSQVRIQYPTSEIANSYCYPTAALPVASAVYSPAVAPPPPVLFPPSGECHYCYPPPPARPYPPPPPPAVQYYVPFRPVAHPWPPGPYFEHRW* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1513 268 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
Apr4g1513 268 SMART C2_3c 6 124 IPR000008 -
Apr4g1513 268 PANTHER INGRESSION PROTEIN FIC1 1 263 - -
Apr4g1513 268 Gene3D C2 domain 1 139 IPR035892 -
Apr4g1513 268 MobiDBLite consensus disorder prediction 42 66 - -
Apr4g1513 268 CDD C2_SRC2_like 6 143 IPR044750 GO:0006952
Apr4g1513 268 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 118 IPR035892 -
Apr4g1513 268 Pfam C2 domain 7 117 IPR000008 -
Apr4g1513 268 PANTHER PROTEIN SRC2-LIKE 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1513 Apr-Chr4 16126463 16127269 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1513 - K22733 gmx:106796391 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1513 4 16126463 16127269 Apr4g1513 4 16126463 16127269 ECH