Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1504 ATGATTCCTGCGTCCTATAACTCTGTTTCTGTTCATCTTGGCGGTGTTGCGTGTGACCCACAACACCCAATTGCGTTGGATCACATTCTGAACAGGTCTTGTTCTTCTGCCTCTTTGTCTTGGAACTGTGGGAGCCTCACTAGGAAGAAAAGCAAGAGGAGGAACTCTATTACTATGGCTTCAAATTTGAGGACCAACAATTTTCTGCGCCACGTGGAATCCATGAAGCTTCTGCCATCTGGTGCTGGCCACATTTCACAGTTGAACGCTGTGATACTTGGAGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTCAGGATTTTGCTACCCAAGCAAATGTTCAGTCCCCTGAACAGTATCTGGAGATGTACAATAGATCGATTGAGGACCCTGCTGGATTTTGGTCTGATATTGCATCAGAGTTCTATTGGAAACAGAGATGGGGGGATAAAGTGTGTGATGAAAATTTTGATGTTAGAAAAGGAAAAATCAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAAGTTGCCATTTACTGGGAAGGCAATGAGCCTGGTATGGATGGTACTTTAACATACACTCAGCTTCTCCATAAAGTTTGCCAGCTTGCAAACTACCTGAAAGATGCTGGTGTGAAGAAAGGAGATGCTGTAGTTATTTATTTGCCCATGCTTATGGAGCTTCCCGTTGCAATGCTTGCCTGTGCTCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGAATCTCTTGCCCAGAGAATAATTGATTGTAAACCAAAAGTTGTAATTACCTGCAATGCTGTTAAAAGAGGCTCCAAGCCTATCTATCTGAAAGATATAGTTGACGCTGCCATCAATGATTCAGCCCAAAATGGGGTCTCTACAGATGTATGCCTAGTTTATGAAAACCCATTGGCAATGAAGAGGGTAGATACCAAATGGAAGGAGGGGCGAGATATATGGTGGCAGGACACCATTCCTCAATATCCAACTACTTGTCCAGTGGAGTGGGTTGACGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTCAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCAAGTGTCGTTGTGTTTGAAGGGGCTCCCAATTATCCTGATGCTGGGCGAAGTTGGGATATTGTTGACAAATATAAAGTGACAATATTCTACACTGCCCCCACACTAGTAAGGTCCCTCATGCGTGATGGTGATGCGTATGTTACTCGCTACTCAAGGAAATCTTTACGAGTGCTGGGAAGTGTAGGAGAGCCCATAAATCCTAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCAGACACCTGGTGGCAAACAGAAACTGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAGCCCGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAAAGGTGTTGAAATAGAAGGTGAGTGCAGTGGGTATTTGTGTGTTAAGAAATCATGGCCAGGGGCATTCAGAACTCTATATGGTGATCATGAGAGATATGAAACAACATATTTCAAGCCATTTGCTGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATATCATTGGCTCACTGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGAATTGGCACAGCAGAAGTGGAATCAGCTCTAGTTTCACATCCTCAGTGTGCAGAGGCTGCTGTGGTTGGTGTGGAACATGAGGTCAAAGGACAGGGAATCTACGCATTTGTTACCATTGTAGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGAACCTCATACTCACAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGACAAAATCCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGAGAAGAATTCTGAGAAAAATAGCTTCGAGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCTGATTCTTGA 2271 0.4452 MIPASYNSVSVHLGGVACDPQHPIALDHILNRSCSSASLSWNCGSLTRKKSKRRNSITMASNLRTNNFLRHVESMKLLPSGAGHISQLNAVILGESLATEEDDFVLPSQDFATQANVQSPEQYLEMYNRSIEDPAGFWSDIASEFYWKQRWGDKVCDENFDVRKGKIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGMDGTLTYTQLLHKVCQLANYLKDAGVKKGDAVVIYLPMLMELPVAMLACARIGAVHSVVFAGFSAESLAQRIIDCKPKVVITCNAVKRGSKPIYLKDIVDAAINDSAQNGVSTDVCLVYENPLAMKRVDTKWKEGRDIWWQDTIPQYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPNYPDAGRSWDIVDKYKVTIFYTAPTLVRSLMRDGDAYVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTIVDGVPYSEELRKNLILTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADS* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1504 756 Gene3D - 627 756 IPR045851 -
Apr4g1504 756 Gene3D - 103 626 IPR042099 -
Apr4g1504 756 Pfam AMP-binding enzyme C-terminal domain 640 718 IPR025110 -
Apr4g1504 756 PANTHER ACETYL-COENZYME A SYNTHETASE 75 756 - -
Apr4g1504 756 Pfam Acetyl-coenzyme A synthetase N-terminus 123 183 IPR032387 -
Apr4g1504 756 CDD ACS 121 743 - -
Apr4g1504 756 ProSitePatterns Putative AMP-binding domain signature. 370 381 IPR020845 -
Apr4g1504 756 PANTHER ACETYL-COENZYME A SYNTHETASE 75 756 - -
Apr4g1504 756 Pfam AMP-binding enzyme 192 631 IPR000873 -
Apr4g1504 756 SUPERFAMILY Acetyl-CoA synthetase-like 111 751 - -
Apr4g1504 756 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 118 752 IPR011904 GO:0003987|GO:0016208|GO:0019427
Apr4g1504 756 Hamap Acetyl-coenzyme A synthetase [acs]. 100 754 IPR011904 GO:0003987|GO:0016208|GO:0019427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1504 Apr-Chr4 15983918 15994213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1504 65 755 Acyl Lipid Metabolism Gene Families AT5G36880 84.515 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1504 K01895 - gmx:100789257 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1504 4 15983918 15994213 Apr4g1504 4 15983918 15994213 ECH