Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1483 ATGGAAAAATATTGGATTTTGAGATGGGTTATGGTGGTGGGGGTGATGTGTTGGTGTGTGGAAGGGCTTGGTGTGAATTGGGGAACCCAAGCAACGCACAAGTTGCCACCAGATACAGTGGTTCAGATGTTGAAGGACAATGGGATTCAGAAAGTGAAGCTTTTTGATGCAGATGATTCAACCATGAGTGCTTTGGCAGGGAGTGGGATTGAAGTTATGGTTGCTATTCCTAATAACCAGCTTGCTGAGATGAATGACTATGGCCGAGCTAAACAGTGGGTTAAGAAGAATGTCACACGTTACAACTTCAATGGAGGAGTTAATGTCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAATGTCACCCTACCTGCACTGCAGAACATTCAAAATGCCCTTAATGAAGCTGGTCTTGGAGATACTGTAAAGGCTACAGTACCCTTAAACGCTGATGTGTATCAGTCTCCAGAGAGCAATCCTGTTCCATCTGCAGGAATTTTTAGGCCTGATATCAGTGAACTCATGACCCAGATAGTGCAATTTCTCAACAAGAATGGCGCACCATTTACTGTGAACATTTACCCCTTCTTAAGTCTATACGGGAATGATGATTTTCCTTTCAACTATGCCTTCTTTGATGGGGTAGACAATCCTGTAAATGATAATGGCACTCCATACACCAATGTCTTTGATGCAAATTTCGATACCTTGGTTGCTGCTCTTAAATCAGTGGGATATGGAGACATGCCCATATTGGTAGGGGAAGTAGGATGGCCTACAGAAGGAGACAAGAATGCCAATGCAGGCAATGCTTTGAGGTTCTATAATGGGCTTCTGCCAAGGCTAGCAGCAAACAAAGGTACCCCACGTCGCCCTGGACATATCGAAGTTTATCTATTTGGACTTATTGATGAGGATGCCAAGAGCATTGCTCCTGGAAACTTTGAGCGACATTGGGGAATTTTTAGATATGATGGGCAACCCAAGTTTCCAATGGACCTTTCAGGTCAGGGTCAAAGCAAATTTCTCATAGGTGCACAGAATGTGAAATATCTTTCTCAAAGGTGGTGCATGTTTAATCCAGATGCCAAGGATCTAAGCAAACTTGCAGATAATATTAATTATGCTTGCACTTTTGCTGATTGCACTGCACTTGGATATGGTTCTTCTTGCAACAACCTTGATGCTAATGGGAATGCCTCTTACGCATTTAACATGTACTACCAGGTTCAAAATCAGGATCCCATGGCATGCAATTTTCAAGGTTTAGCCAAGCTTTCTACAAACAATATCTCAACACCCACTTGCAATTTTATCATTCAGATAGTTCCTTCTTCATCCTCTTCTTTGATGCCTTCACTTGTAGCCTTCTTTTCTGTTACTCTACTCATTCTGTTTTGGTAG 1431 0.4214 MEKYWILRWVMVVGVMCWCVEGLGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDADDSTMSALAGSGIEVMVAIPNNQLAEMNDYGRAKQWVKKNVTRYNFNGGVNVKYVAVGNEPFLKSYNNSFLNVTLPALQNIQNALNEAGLGDTVKATVPLNADVYQSPESNPVPSAGIFRPDISELMTQIVQFLNKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVDNPVNDNGTPYTNVFDANFDTLVAALKSVGYGDMPILVGEVGWPTEGDKNANAGNALRFYNGLLPRLAANKGTPRRPGHIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQGQSKFLIGAQNVKYLSQRWCMFNPDAKDLSKLADNINYACTFADCTALGYGSSCNNLDANGNASYAFNMYYQVQNQDPMACNFQGLAKLSTNNISTPTCNFIIQIVPSSSSSLMPSLVAFFSVTLLILFW* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1483 476 Gene3D - 359 458 - -
Apr4g1483 476 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Apr4g1483 476 Gene3D Glycosidases 22 350 - -
Apr4g1483 476 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Apr4g1483 476 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 466 - -
Apr4g1483 476 SMART X8_cls 364 447 IPR012946 -
Apr4g1483 476 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Apr4g1483 476 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 466 IPR044965 GO:0004553|GO:0005975
Apr4g1483 476 Pfam X8 domain 365 433 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1483 Apr-Chr4 15330800 15333962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1483 6 452 Miscellaneous Gene Families AT1G64760 77.629 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1483 - - gmx:100815300 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1483 4 15330800 15333962 Apr4g1483 4 15330800 15333962 ECH