Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1478 ATGGCAATTGCACGCACCGGAGTCTACGTTGACGACTATTTAGAGTACGCCAGCACATTGCCCGCTGAGCTTCAGAGGCTGCTCAACACCGTCCGAGAACTTGATGAACGATCCCAATCTATGATAAATCAGACCAGGCAGCAGACAAAGTACTGTATGGGATTCTCATCACATGGTTCTAAGAAGGGTAATCACAATTATAATAACAATTATGTGAATGAGGATGATGATGCTGCTATGGAGAAAATGCGAAAAGAAATTGAGGCAAATCAGGATAGTGCATTGAGTCTATGTACTGAGAAGGTTTTATTGGCGCGACAAGCATATGACCTGATTGATAGCCATGTAAAACGACTTGATGAGGATTTAAACAACTTTGCTGATGATTTAAAGCAAGAGGGGAAAATACCACAAGATGAACCAGCAATTCTTCCCCCAATGCCTATAGTTCCTAAAGTCGAAAAACGCAGGCCCATATATGTAACTCCTCAATCAAGAAGACTTGATTACAGGGATAGAGATTGGGATCGGGAGCGTGATAGGGACTTTGAGCTAATGCCTCCACCAGGAAGTCATAAGAAGGAGTATGCAACCCCTATGGATGTTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGTGCCAAGGAGGTGAATGGTTCCACTATTCATGTGTTGGCCTAACACAAGAGACAAGGTTCAAAGGAAAGTGGTATTGTCCGACTTGCAGATTACTCCCACAATGTCAATGA 765 0.4288 MAIARTGVYVDDYLEYASTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSKKGNHNYNNNYVNEDDDAAMEKMRKEIEANQDSALSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFADDLKQEGKIPQDEPAILPPMPIVPKVEKRRPIYVTPQSRRLDYRDRDWDRERDRDFELMPPPGSHKKEYATPMDVDQPIDPNEPTYCVCHQCQGGEWFHYSCVGLTQETRFKGKWYCPTCRLLPQCQ* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1478 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 250 IPR013083 -
Apr4g1478 254 PANTHER PHD FINGER PROTEIN ING2 2 250 - -
Apr4g1478 254 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 126 IPR024610 -
Apr4g1478 254 Coils Coil 24 44 - -
Apr4g1478 254 SUPERFAMILY FYVE/PHD zinc finger 187 249 IPR011011 -
Apr4g1478 254 PANTHER INHIBITOR OF GROWTH PROTEIN 2 250 IPR028651 -
Apr4g1478 254 SMART ING_2 9 126 IPR024610 -
Apr4g1478 254 CDD ING_plant 17 123 - -
Apr4g1478 254 Gene3D - 5 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1478 Apr-Chr4 15268411 15271974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1478 K11346 - gmx:100787916 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1478 4 15268411 15271974 Apr4g1478 4 15268411 15271974 ECH