Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1475 ATGGCACCTGTTGCTCCTTCTGACAAAGCTACAGATTTACTGCAGAATTTGTCCCTGGATTCTGAGTCCAAGAGTATTGGAGTTGCTGAGCCTGCCAAGAAGAATGGACCTGTTTTTTCCAATGATGCTGCTAAGGGAATGGCCAAGCCGTTTAATCCGAATCCATGTTTTGTTCCAAATGGATACCCTTCTACTGCATACTATTATGGAGGTTACGAAGGGCAAGGCGATTGGAATATTTATTCCAGATATATGAACCTTGATGGAGGGATGGCTCAAGGGGTTTATGCGGATGGCTGCTCTTATATGTACCATCAAGGTTATGGTTACACACCATATGCAGCGTATGCACAGCCCAATTCCTCTTCTCCAACCATTCCACAGGATGGCCAGCTCTATGGGCTGCAACAGTACCAGTATCCTTGTTCTTATTACAAATCTCCTGCTTCTGCTGATGTATCGTTTACTCCAAACAAAATCAGTGCTCCACATGGAGAAATATCAACTACAGTTGATGCTGATCACCTTCCTTCCTCAAATGTTATGAATAAAGGAAACGCTGTTAGCATGAACAATGGTGATTTTCCAAATGACAACGGGTTAAAGGGATATTTAACAAGTTCCCAGTCCACATCTTTGAATACAAATGATTCTTATCTAGGGACTAGCTTGCCAGCTTATTCTCCTCTGCCAGGATATCAAGGTCCTAGAACGAGTACTCATGGTACACAGTCGACAGTCCCTTCAGACGTGTCATTAGTTTCTGATAGACAGTCAAAACATGGAGCCAAGTTTGGATTATCTTCACCAGTGGTGCCTTTCAAAGATTTTACATCTCAAAAGAATCAAAGGCATCCTCAGTCACTTCCACAATTTACGAACTTCAATAGTTCCAGACATCCATCTGGACCAGAACTGGTTTCCGGATACATGAACGGGATGTATCCAAGCAGCAGAATGTACAATCAATATGGAAATCCATTTAGGGCTAATCCTCGTTTTGGATCTGCTGCATATGGATCTAGAACAGGCTCTGTTAATAACAAGCTTAATGCTACAAGTGATGGCTGGGGTGCTAACCATTTTAAAAAAAATATGGACGGTTTCAGTGAGCTAAATAAAGGACCCAGAGCTGCCAAGAGTTCTGACAACAGAAATATCAAAAGTCTTGGACCTGTCACATTATTACTCAAAGGACAGAACCTTCCAGCAAAGAGCGACAAAAAGGAAGTTTCTCTGGTTCCCAATAAGGAACAGTACACTGGGGAAGATTTTTCTGAGAATCATTTTGATGCAAAATTTTTTGTCATCAAATCCTATAGCGAGGATGATATTCATAAAAGCGTAAAATATAGTGTTTGGGCTAGCACCCCTAACGGCAATAAAAAGTTGGATGCAGCATATCATGAAGCCAAGGAGAAGCCTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTGAACACTAGTGGGCAATTTGTTGGCTTAGCAGAGATGGTGGGTCCTGTTGATTTTGGTAAAACTGTAGAGTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATAAAGGATATTCCAAATAGTGCATTGAGGCACATCACACTAGAGAACAATGAAAACAAACCTGTAACAAATAGTAGGGATACTCAGGAGGTTAAATTTGAGAAGGGTATTCAAATTGTCAAAATTTTCAAGGAGCATTCGAGCAAAACATGCATCTTGGATGATTTTGGGTTTTATGAGGCTCGTGAAAAGGCGACTCAGGAGAAAAAATCTAATGAACAGCAGGTAAAATACTTGCCTTTACATCAGGTCAGTAAGCCCAGTGATTTAACAATTGGGACAGTCACATTACCTAAGTCTCTTGATTCGACCTTGATGAATGAATCAGCTACTCCAAGTTCAACAGAAGGAAGAATGAATGCGGAAGGGCTTTTAGAAGGGAATGGATCGACTACAGTACTTGAAAACTCTTCTAATAGCTGTTAA 2004 0.4122 MAPVAPSDKATDLLQNLSLDSESKSIGVAEPAKKNGPVFSNDAAKGMAKPFNPNPCFVPNGYPSTAYYYGGYEGQGDWNIYSRYMNLDGGMAQGVYADGCSYMYHQGYGYTPYAAYAQPNSSSPTIPQDGQLYGLQQYQYPCSYYKSPASADVSFTPNKISAPHGEISTTVDADHLPSSNVMNKGNAVSMNNGDFPNDNGLKGYLTSSQSTSLNTNDSYLGTSLPAYSPLPGYQGPRTSTHGTQSTVPSDVSLVSDRQSKHGAKFGLSSPVVPFKDFTSQKNQRHPQSLPQFTNFNSSRHPSGPELVSGYMNGMYPSSRMYNQYGNPFRANPRFGSAAYGSRTGSVNNKLNATSDGWGANHFKKNMDGFSELNKGPRAAKSSDNRNIKSLGPVTLLLKGQNLPAKSDKKEVSLVPNKEQYTGEDFSENHFDAKFFVIKSYSEDDIHKSVKYSVWASTPNGNKKLDAAYHEAKEKPGGCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHVIKDIPNSALRHITLENNENKPVTNSRDTQEVKFEKGIQIVKIFKEHSSKTCILDDFGFYEAREKATQEKKSNEQQVKYLPLHQVSKPSDLTIGTVTLPKSLDSTLMNESATPSSTEGRMNAEGLLEGNGSTTVLENSSNSC* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1475 667 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 5 667 - -
Apr4g1475 667 Pfam YT521-B-like domain 432 570 IPR007275 GO:0003723
Apr4g1475 667 MobiDBLite consensus disorder prediction 651 667 - -
Apr4g1475 667 ProSiteProfiles YTH domain profile. 432 569 IPR007275 GO:0003723
Apr4g1475 667 MobiDBLite consensus disorder prediction 281 301 - -
Apr4g1475 667 MobiDBLite consensus disorder prediction 631 667 - -
Apr4g1475 667 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 5 667 IPR045168 -
Apr4g1475 667 MobiDBLite consensus disorder prediction 227 247 - -
Apr4g1475 667 MobiDBLite consensus disorder prediction 233 247 - -
Apr4g1475 667 Gene3D ph1033 like domains 410 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1475 Apr-Chr4 15248472 15252646 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1475 - K20102 gmx:100818027 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1475 4 15248472 15252646 Apr4g1475 4 15248472 15252646 ECH