Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1455 ATGGCGAGCGATCCGAACCAGACGCAGGGCCAACTCGCGCTAATCCTGGGCCCCGATTCGAGCCACTTGGAATCCCTAATAACGAAGCTCATGTCCTCTTCCAACGAGCAACGTTCTCAGGCAGAGTCGCTCTTCAATCTGTGCAAGCAGGCCCACCCAGACTCCCTTATCCTAAAACTCGCCCAAATCCTTCACTCTTCCCCAAACCCCGAAATCCGAACCATGTCCGCCATCCTACTCCGCCGCCACCTCACGCGCCACCACGACTCATTCCTCTGGCCCCACCTCTCCCCTTCCACGCGCTCTTCTCTCCACTCCCTCCTCCTCTCCTCGCTCCACAACGAGCCCGTCAAATCCATCGCCAAAAAGCTCTGTGACACCGTTTCCGAACTCGCCGCCGCCATCCTCCCCGATGACTCCGCCGCCTGGCCGGACCTCCTCCCTCTCCTCTTCCAGTGGGTAACTTCAACCGACCCGAGGCTTCAAGAAATCTCTCTCCTCATCTTCGCTCAATTGGCTCATTACATAGGCCAAACCCTACTCCCTCAATTGTCCACTCTCCACACCGTTTTCCTCCGCTGCCTCCACTCCTCCATTGCCTCCGACGTCCGCATCGCTGCCCTCGCCGCCTCCATCAACTTCGTTCAGTGCCTTAACAGTTCCTCCGACAGGGACAGGTTCCAGGACTTGCTTCCTCACATGATGCAAACCTTGACCGAAGCGCTTAATTCCGGCCAGGAGGCCACCGCGCAGGAGGCGCTTGAGCTTCTCGTCGAACTCGCCGGTACCGAGCCGAGGTTCCTCCGGCGCCAGATTGTGGATGTTGTTGGCTCCATGCTGCAGGTCGCTGAGGCTGAGTCTTTGGAGGAAGGGACGCGGCATTTGGCTATTGAGTTTGTGGTGACCCTTGCTGAGGCGAGGGAGCGGGCTCCTGGGATGATGAGAAAGCTGCCGCAGTTCGTGCGGAAGCTGTTTGGTGTTTTGATGAATTTGTTGCTGGATATTGAAGATGAACCGGCGTGGCACGCGGCGGAGACGGAAGATGAGGATGCTGGTGAAACTAGTAACTATGGGTTTGGACAGGAATGTTTGGATAGGCTTTCAATTTCCTTGGGCGGGAATACTATTGTGCCGGTTGCTTCTGAGCTGTTGCCGACTTACTTGGCTGCGCCTGAGTGGCAAAAGCACCATGCTGCGCTCATTGCACTTGCACAAATTGCCGAGGGCTGTTCCAAGGTGATGATAAAGAATCTGGAGCAGGTATTGTCGATGGTTTTGAACTCATTTCGTGATCCCCACCCTCGAGTGCGATGGGCAGCTATAAATGCCATTGGGCAATTATCCACAGATTTGGGGCCAGACTTGCAGGCTAGATATCACCACTTAGTGCTGCCGGCATTAGCTGGGGCCATGGATGATTTTCAAAACCCACGAGTACAGGCTCATGCTGCTTCCGCGGTGCTAAATTTCACTGAGAATTGTACCCCAGATATCCTAACACCTTACTTGGATGGGATTGTGAGCAAACTTCTGGTACTCTTGCAGAATGGGAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCTTTAGCATCAGTTGCAGATTCTTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTCTGATGAATGCAAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGGATGGCTGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTTATGGATGTCTTGATGTCGCTGCAACAATCTCAACTGGACGCTGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGACAGGATTTTCTCCCATATATGGGCTTTGTCATGCCTCCTTTGCTCCAGTCTGCACAACTTAAGCCTGATGTTACCATTACGTCAGCAGATTCTGATACTGAATTCGATGAAGATGATGACAGCATTGAAACTATCACACTTGGGGACAAAAGGATAGGCATTAAGACCAGTGTCTTGGAGGAGAAGGCTACCGCATGTAACATGCTATGTTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCCTGCACATTGGTTCCTCTTCTTAAATTTTATTTCCACGAAGAAGTTAGGAAGGCAGCAGTTTCAGCTATGCCAGAACTGTTATCCTCGGCAAAATCAGCTGTAGAGAAGGGACAATCACAAGGTCGAGATGAGACTTACATAAAACAGTTGTCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCTAGCATGTTGGACGCATTAAACGAATGCATACAGGTCTCTGGACCACATCTAGATGAAAATCAAGTGAGGAGCATTGTTGATGAGATCAAACAAGTCATTACAGCCAGTTCATCAAGGAAACACGAAAGAGCAGAGAGGGCCAAAGAAGAAGACTTTGATGCTGAAGAAAGAGAACTACTCAAGGAAGAAAATGAGCAAGAAGAGGAGCTTTTTGATCAAGTTGGTGATTGCTTGGGGACATTGATAAAAACATTCAGGGCCTCTTTCTTGCCTTTCTTTGATGAGCTTTCATCGTACATAACACCTATGTTTGGTAAAGATAAAACCTCAGAGGAAAGGAGAATTGCTATTTGTATATTTGATGATGTTGCTGAGCACTGTCGTGAAGCAGCTCTTAAGTATTATGATTCTTTTCTTCCATTCTTACTTGAAGCTTGCAATGATGAATATCCAGATGTTCGACAGGCAGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGGTTAGATGCCGTGATAAGGCATCCAAATGCACTACATTGTGATAATGTAATGGCATATGACAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTCCACCGTGATAGTATAAATGCAACACAGGTTTTTCCTGCCTGGCTAAGTTGCTTGCCCATAAAAGGTGATTTAATTGAGGCTAAGGTTGTGCATGACCAACTTTGTTCAATGGTTGAAAGATCAGATAGAGAACTTATAGGTCCTAACAATCAATATCTTCCCAAAATTGTTGCAGTTTTTGCGGAGATTTTATGTGCGGGAAATGATCTAGCAACCGAACAAACTGCCAGTCGGATGATTAATTTATTGAGGCAGCTTCAGCAGACTTTGCCACCTTCTACCCTTGCTTCAACCTGGTCATCCTTGCAGCCCCAGCAGCAGCTTGCACTTCAGTCTATCCTATCGTCCTAA 3354 0.4797 MASDPNQTQGQLALILGPDSSHLESLITKLMSSSNEQRSQAESLFNLCKQAHPDSLILKLAQILHSSPNPEIRTMSAILLRRHLTRHHDSFLWPHLSPSTRSSLHSLLLSSLHNEPVKSIAKKLCDTVSELAAAILPDDSAAWPDLLPLLFQWVTSTDPRLQEISLLIFAQLAHYIGQTLLPQLSTLHTVFLRCLHSSIASDVRIAALAASINFVQCLNSSSDRDRFQDLLPHMMQTLTEALNSGQEATAQEALELLVELAGTEPRFLRRQIVDVVGSMLQVAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVLMNLLLDIEDEPAWHAAETEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVLSMVLNSFRDPHPRVRWAAINAIGQLSTDLGPDLQARYHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVACTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQSQGRDETYIKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLDENQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEERELLKEENEQEEELFDQVGDCLGTLIKTFRASFLPFFDELSSYITPMFGKDKTSEERRIAICIFDDVAEHCREAALKYYDSFLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDAVIRHPNALHCDNVMAYDNAVSALGKICQFHRDSINATQVFPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCAGNDLATEQTASRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1455 1117 Pfam Importin repeat 6 786 890 IPR041389 -
Apr4g1455 1117 SMART TOG_3 370 611 IPR034085 -
Apr4g1455 1117 Coils Coil 832 856 - -
Apr4g1455 1117 Pfam HEAT repeats 387 486 - -
Apr4g1455 1117 Gene3D - 19 1116 IPR011989 -
Apr4g1455 1117 Pfam Importin repeat 287 378 IPR041653 -
Apr4g1455 1117 Pfam Interferon-related developmental regulator (IFRD) 490 626 IPR007701 -
Apr4g1455 1117 Pfam HEAT repeat 925 953 IPR000357 GO:0005515
Apr4g1455 1117 ProSiteProfiles HEAT repeat profile. 421 459 IPR021133 -
Apr4g1455 1117 PANTHER IMPORTIN BETA 14 1116 IPR040122 GO:0006606
Apr4g1455 1117 PANTHER BNAC09G37860D PROTEIN 14 1116 - -
Apr4g1455 1117 SUPERFAMILY ARM repeat 22 956 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1455 Apr-Chr4 15016493 15025994 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1455 K20222 - gmx:100797431 1955.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1455 4 15016493 15025994 Apr4g1455 4 15016493 15025994 ECH