Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1448 ATGGCTAAAATGGCCATGATTTTGTTGGGGCTTTGTCTACTAGGTAGCTGGGCAGGCTTGTTGAAGGTAGAATACATGAAATACAAGGACCCTAAACAGTCAATTGATATGCGGGTTGATGATCTTATTAGCAGAATGACTCTTGAGGAGAAAATTGGTCAAATGTTGCAGATTGAGCGCAAGTATGCATCTGCTGAGTTGGTTAAGAAGTATTTTATTGGGAGTGTTATGAGTGAGGGAGGGAGTATTCCAGCTCCACAGGCTTCAGCTGAATCCTGGATTGACATGGTGAATGAATTTCAGAAGGGTGCTTTATCCACCCGGCTTGGAATTCCAATGTTTTATGGGATAGATGCTGTTCATGGGCACAACACTGTTTACAAAGCAACTATTTTTCCTCACAATATTGGGCTCGGAGCTACTGGGGACCCTGAACTAGTTAAAAGAATCGGAGCTGCAACTGCCCTTGAAGTTAGAGCAACAGGAATTCAGTATGTTTATGCACCTTGTATAGCAGTCTGTAGAGATCCAAGATGGGGGCGGTGTTATGAAAGCTACAGTGAAGATCCTAAACTAGTTCAAGCCATGACCGAAATCATATCAGGATTGCAAGGGGACATCCCTGATAATTCACCGAAGGGTGTTCCTTTTCTAGCTGGAAAGGAAAAGGTTTTAGCTTGTGCTAAGCACTACGTCGGTGATGGAGGAACAATCAACGGGATTGATGAGGACAACACTGTTATAGATAGAGATGGATTGATGAGAATTCACATGCCTGGTTATTTAAGCTCAATTAACAAGAGTGTGGCAACCATTATGGTCTCATACTCCAGTTGGAATGGAGTAAAAATGCATGCTAACCATGACCTTATTACTGGCTACCTCAAGAATACTCTCCATTTCAAGGGCTTTGTTATTTCAGATTTTGAGGGTATTGATAGGATCACCTCTCCACCTCATGCAAACTTCACTTATTCAGTTGAAGCAGGAGTGTCTGCTGGCATTGACATGTTTATGATTCCAAAGCTTTACACAGAATTCATAGATGATCTAACCATGTTGGTGAAGAATAAGTTCATTCCTATGAGTCAAATTGATGATGCTGTCAAAAGAATTTTATGGGTTAAGTTCATGATGGGTATTTTTGAGAAGCCTTTAGCCGACTACAGTTTGGTCGGATATTTGGGAATTCAGGAGCATAGATACTTGGCTAGGGAAGCTGTAAGGAAATCAATGGTCCTTCTAAAAAATGGTGAATCTGCTGATAACCCTTTATTGCCTCTTCCTAAAAAGTCACCAAAAATACTTGTGGCTGGAAGCCATGCAGATAATCTAGGATATCAGTGTGGTGGCTGGACTATTGAATGGCAAGGAATCAGTGGAAACAATCTTGTCAGAGGGACTACAATTCTCACTGCAATAAAAAACACCGTTGATCCAGAAACCAAAGTGATCTACAAGGAGAACCCTGATGTAGAATTTGTTAAATCCAATGGATTTTCCTATGGTATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGCATGGTGACAACATGAACTTGACAATCCCTGACCCTGGTCCTGAGACCATAACAAATGTCTGTGGAACAATAAAATGTGTGGTGGTCATTATTTCTGGTCGCCCTGTAGTTATTGAACCATATGTTGCTTTAATAGATGCACTTGTTGCTGGTTGGCTTCCAGGTAGTGAAGGCCAAGGTGTGGCTGATGTCTTATATGGTGACTATGGTTTCACAGGAAAGCTTCCAAGGACATGGTTCAAAACAGTTGATCAACTTCCAATGAATGTTGGAGATCCTCATTATGATCCCCTCTTCCCTTTTGGGTTTGGCCTTTCTACCGAACCTATTGAGGCCATTTACTCTGCATAG 1896 0.4156 MAKMAMILLGLCLLGSWAGLLKVEYMKYKDPKQSIDMRVDDLISRMTLEEKIGQMLQIERKYASAELVKKYFIGSVMSEGGSIPAPQASAESWIDMVNEFQKGALSTRLGIPMFYGIDAVHGHNTVYKATIFPHNIGLGATGDPELVKRIGAATALEVRATGIQYVYAPCIAVCRDPRWGRCYESYSEDPKLVQAMTEIISGLQGDIPDNSPKGVPFLAGKEKVLACAKHYVGDGGTINGIDEDNTVIDRDGLMRIHMPGYLSSINKSVATIMVSYSSWNGVKMHANHDLITGYLKNTLHFKGFVISDFEGIDRITSPPHANFTYSVEAGVSAGIDMFMIPKLYTEFIDDLTMLVKNKFIPMSQIDDAVKRILWVKFMMGIFEKPLADYSLVGYLGIQEHRYLAREAVRKSMVLLKNGESADNPLLPLPKKSPKILVAGSHADNLGYQCGGWTIEWQGISGNNLVRGTTILTAIKNTVDPETKVIYKENPDVEFVKSNGFSYGIVVVGEHPYAEMHGDNMNLTIPDPGPETITNVCGTIKCVVVIISGRPVVIEPYVALIDALVAGWLPGSEGQGVADVLYGDYGFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGLSTEPIEAIYSA* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1448 631 Gene3D - 21 395 IPR036962 GO:0004553|GO:0005975
Apr4g1448 631 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 5 630 - -
Apr4g1448 631 Pfam Glycosyl hydrolase family 3 C-terminal domain 412 621 IPR002772 GO:0004553|GO:0005975
Apr4g1448 631 Gene3D - 397 623 IPR036881 GO:0004553|GO:0005975
Apr4g1448 631 PRINTS Glycosyl hydrolase family 3 signature 108 124 IPR001764 GO:0004553|GO:0005975
Apr4g1448 631 PRINTS Glycosyl hydrolase family 3 signature 132 151 IPR001764 GO:0004553|GO:0005975
Apr4g1448 631 PRINTS Glycosyl hydrolase family 3 signature 178 194 IPR001764 GO:0004553|GO:0005975
Apr4g1448 631 PRINTS Glycosyl hydrolase family 3 signature 224 240 IPR001764 GO:0004553|GO:0005975
Apr4g1448 631 PRINTS Glycosyl hydrolase family 3 signature 294 312 IPR001764 GO:0004553|GO:0005975
Apr4g1448 631 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 5 630 - -
Apr4g1448 631 Pfam Glycosyl hydrolase family 3 N terminal domain 47 373 IPR001764 GO:0004553|GO:0005975
Apr4g1448 631 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 412 621 IPR036881 GO:0004553|GO:0005975
Apr4g1448 631 SUPERFAMILY (Trans)glycosidases 25 411 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1448 Apr-Chr4 14885785 14889360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1448 1 624 Glycoside Hydrolase AT5G20950 69.712 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1448 K05349 - gmx:100779642 1160.59