Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1446 ATGCAGGTAACTGAGACGAGGACGGTTCAAGTCAAGCAGCTTTCAGATCTAGCTGGTGAGAGAGAGATTCATGAGTTCTTCTCCTTTTCTGGAGAAATTGAACATATTCAGATCCTGAGTGAACATGGGCAATCAAAGACTGCGTTTGTGACATTTAAAGATCCCAAAGCACTTGAAATTGCATTATTGTTATCGGGAGCAACAATAGTAGACCAGATTGTAAGTATAACTCCCGCTGAGAACTATGTACCAAATCGTGAGATGCAGGAAGTAAGGGTGGTGGAAAATGCTATAAATGTGGCTCCTTCTGAAAATGTCTCATTAAATATTGAGGAGGAGAAAAACAACCATACCAATGGAAAAATGTACCTTAGTAGAGCACAAGATGTGGTTACAAGTATGCTGGCAAAAGGTTCAGCAATAAGGCAAGATGCTGTGAACAAAGCTAAAGCATTTGATGAAAAGCATCAGTTGACTGCTAACGCTTCTGCAAAGGTCATTTCATTTGACAAGCGAGTTGGACTGACAGAGAAATTGACAGTTGGCATTTCTGTAGTGAATCAGAAAGTGAAGAATGTGGATCAGAGGCTTCATGTTTCTGATAAAACAATGGCAGCAATATTTGCAGCTGAGAGGAAGTTGAATGATACTGGATCAGCTGTCAAAACTAGCAGATACGTGACTGCCGGAACAGCATGGTTAAATGGTGCTTTTAGCAAGGTGGCAAAGGCTGGACATGTTGCTAGTACTAAAACTAGAGAAAAATTCCATACGGCTGTTTCAAACTTGACGGCAAAGGAACCTTCAGTAGCTGCATAG 819 0.4103 MQVTETRTVQVKQLSDLAGEREIHEFFSFSGEIEHIQILSEHGQSKTAFVTFKDPKALEIALLLSGATIVDQIVSITPAENYVPNREMQEVRVVENAINVAPSENVSLNIEEEKNNHTNGKMYLSRAQDVVTSMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISFDKRVGLTEKLTVGISVVNQKVKNVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKVAKAGHVASTKTREKFHTAVSNLTAKEPSVAA* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1446 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 69 IPR000504 GO:0003723
Apr4g1446 272 SMART rrm1_1 8 77 IPR000504 GO:0003723
Apr4g1446 272 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 272 - -
Apr4g1446 272 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 81 IPR000504 GO:0003723
Apr4g1446 272 Gene3D - 1 91 IPR012677 -
Apr4g1446 272 SUPERFAMILY RNA-binding domain, RBD 4 87 IPR035979 GO:0003676
Apr4g1446 272 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 4 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1446 Apr-Chr4 14793852 14800728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1446 - - gmx:100779011 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1446 4 14793852 14800728 Apr4g1446 4 14793852 14800728 ECH