Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1444 ATGGAAAGCAAGCATTCACATACGCCTAATCGGTCTTACGAGGACTTTGATCCTTTGTTTACATGGCACAGAGAAGAGGCCCGTGACACCCTTGAACTCCACCTTCCAGGTTTTAGGAGAGATCAAATACGAATTCAGATCAATCATCTTGGTTTTCTGGTAATAAGCGGAGAGCGTCCATTGGATGGAACAAGATGGAAACGATTCAAGAAAGAATTTGAAATCCCAACATATTGCAATGAAGATGCTATTCATGGCAATCTCATGCAGAGCATTCTTTCGGTGGTAATGCCAAAGAAAAGTCCTCAACTTCAACAAGAGAGAAAATTCCCACAAACCCAACACGAGAAAGAGAAAAAGACATATCAGAATAAGGAATTTGAAGGACGGGGTACTAATGAAGACACTGAATTCACAGCCAAAGAGGGAATACAAGAACATACCCATCATACAAGAGAGTACCAATCTGAAGAAAATAATGTGAATTTAACGCCCGAAACGACTAGAGAGGTTGCCTTTAAGTTCATGGTTGTGATCATTATGATATTGGTTATAGCAAGTTATCTAGCAGATATAAGCAAAAACCTCGTGGCTCATGCTCAATCATATTTTCACAATTAG 621 0.3961 MESKHSHTPNRSYEDFDPLFTWHREEARDTLELHLPGFRRDQIRIQINHLGFLVISGERPLDGTRWKRFKKEFEIPTYCNEDAIHGNLMQSILSVVMPKKSPQLQQERKFPQTQHEKEKKTYQNKEFEGRGTNEDTEFTAKEGIQEHTHHTREYQSEENNVNLTPETTREVAFKFMVVIIMILVIASYLADISKNLVAHAQSYFHN* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1444 206 CDD ACD_sHsps-like 30 99 - -
Apr4g1444 206 Gene3D - 1 107 IPR008978 -
Apr4g1444 206 MobiDBLite consensus disorder prediction 110 138 - -
Apr4g1444 206 Pfam Hsp20/alpha crystallin family 24 109 IPR002068 -
Apr4g1444 206 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 11 116 IPR002068 -
Apr4g1444 206 SUPERFAMILY HSP20-like chaperones 10 103 IPR008978 -
Apr4g1444 206 MobiDBLite consensus disorder prediction 105 138 - -
Apr4g1444 206 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 5 204 - -
Apr4g1444 206 PANTHER HEAT SHOCK PROTEIN 26 5 204 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1444 Apr-Chr4 14752283 14753475 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1444 - - gmx:100801505 257.299