Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1441 ATGCTCGCACTCTGTTCTCTGCTTCAAGCTACTCCCTCGAAGCGAAGAAGAAGCCACAGAGAACTAGTCTCTACTCTAACTCTAAGAACAATGGCATCCCATATTGTTGGATACCCTCGCATGGGCCCAAAGAGAGAGCTGAAGTTCGCTCTGGAGTCGTTCTGGGATGGGAAGAGCAGCGCCGAGGATTTGCAGAAGGTGGCTGCTGATCTCAGGGCATCCATCTGGAAGCAGATGGCTGCTGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCTTACTACGATCAGGTGCTCGATGCCACCGCCACCCTCGGTGCCGTTCCACCCAGGTATGGATGGGCCGGTGGCGAGATTGGGTTCGACACCTACTTTTCCATGGCCAGGGGTAATGCTACCGTGCCTGCCATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCTGAATTGGGACCTGAAGTGAACTTCAGCTATGCTTCTCACAAGGCTGTTGAAGAATACAAGGAGGCTAAGGCGCTTGGAGTAGATACCGTTCCTGTTCTTGTTGGCCCAGTCTCGTACTTGTTGCTCTCCAAACCTGCCAAGGGTGTCGAGAAATCCTTTTCTCTCCTTTCTCTCCTTCCCAAAGTTCTTGCTATCTACAAGGAGGTGATTGCTGATCTTAAGGCAGCTGGTGCTTCATGGATTCAATTTGATGAACCTACCCTTGTCTTGGACCTTGAATCTCACAAGTTGCAAGCATTTACTGATGCATACGCAGAACTTGCACCAACTTTGTCTGGTTTGAATGTTCTTGTTGAGACCTACTTTGCAGACATCCCTGCTGCAGCATACAAGACCCTCACATCTCTGACTGGTGTCACCGCTTATGGTTTTGATTTAATCCGTGGAACTCAGACACTTGATTTGATCAAGGGTGGATTTCCCAGTGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTCTCAGTACATTGCATGGTCTTGAGGGCATTGTGGGCAAAGATAAACTCGTTGTATCTACCTCTTGCTCCCTTCTTCACACTGCTGTCGATCTTGTGAATGAGACCAAGTTGGATGATGAGATCAAGTCATGGTTAGCTTTTGCTGCCCAGAAAATTATTGAAGTGAATGCTTTGGCTAATGCCTTGTCTGGCAAAAAGGATGAGGCCTTCTTCTCTGCTAATGCTGCCGCTCAGGCTTCAAGGAAGTCCTCTCCAAGAGTGACTAATGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCTGACCATCGCCGAGCTACTAATGTCAGTGCCAGACTGGATGCCCAACAAAAGAAGCTTAACCTTCCAATCCTCCCAACCACCACTATTGGATCGTTCCCTCAGACTGTAGAATTGAGGAGGGTTCGCCGGGAATTCAAGGCTAACAAGATCTCCGAGGAAGAGTATGTTAAGGCAATTAAGGAGGAAATCCGCAAAGTTGTTGAACTTCAAGAAGAGCTTGATATTGATGTCCTGGTTCATGGAGAACCTGAGAGGAATGATATGGTTGAGTACTTTGGCGAGCAATTGTCAGGCTTTGCCTTCACCGTTAATGGATGGGTGCAATCCTATGGATCTCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACTGTCTTCTGGTCATCTTTGGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACTGGCCCCGTTACCATTCTCAACTGGTCCTTTGTTAGAAATGATCAGCCCAGATCTGAGACCTGCTATCAAATTGCCTTGGCTATCAAGGACGAAGTAGAAGACCTTGAAAAGGCTAGCATTGGTGTTATCCAAATTGATGAAGCTGCTTTGAGAGAGGGACTGCCACTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATTCCTTCAGGATCACCAATGTTGGTGTGCAGGATTCCACTCAGATCCACACTCACATGTGCTACTCTAACTTCAACGACATCATCCACTCAATCATTGATATGGATGCTGATGTTATCACCATTGAGAACTCTCGTTCTGATGAAAAACTCCTGTCAGTCTTCCGTGAAGGAGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTCTACGATATTCACTCCCCAAGAATACCACCAACTGAAGAAATTGCTGACAGGATCAACAAGATGCTTGCAGTGCTTGAGAAAAACATCTTGTGGGTCAACCCTGACTGTGGGCTCAAGACCCGTAAGTACACAGAGGTGAAGCCAGCCCTCACAAACATGGTTGCCGCAGCAAAACTCATCCGCAACGAGCTTGCCAAGTGA 2382 0.4803 MLALCSLLQATPSKRRRSHRELVSTLTLRTMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRASIWKQMAAAGIKYIPSNTFSYYDQVLDATATLGAVPPRYGWAGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPEVNFSYASHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLLPKVLAIYKEVIADLKAAGASWIQFDEPTLVLDLESHKLQAFTDAYAELAPTLSGLNVLVETYFADIPAAAYKTLTSLTGVTAYGFDLIRGTQTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLHGLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKIIEVNALANALSGKKDEAFFSANAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKANKISEEEYVKAIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSLAQSFTKRPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDLEKASIGVIQIDEAALREGLPLRKSEQAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELAK* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1441 793 CDD CIMS_C_terminal_like 463 786 IPR002629 GO:0003871|GO:0008270|GO:0009086
Apr4g1441 793 SUPERFAMILY UROD/MetE-like 427 789 IPR038071 -
Apr4g1441 793 SUPERFAMILY UROD/MetE-like 33 425 IPR038071 -
Apr4g1441 793 Pfam Cobalamin-independent synthase, Catalytic domain 462 785 IPR002629 GO:0003871|GO:0008270|GO:0009086
Apr4g1441 793 PIRSF Met_synth_MetE 30 793 IPR006276 GO:0003871|GO:0008270|GO:0009086
Apr4g1441 793 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 31 790 IPR006276 GO:0003871|GO:0008270|GO:0009086
Apr4g1441 793 Pfam Cobalamin-independent synthase, N-terminal domain 33 345 IPR013215 GO:0003871|GO:0008270|GO:0008652
Apr4g1441 793 TIGRFAM met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 36 789 IPR006276 GO:0003871|GO:0008270|GO:0009086
Apr4g1441 793 Gene3D - 35 555 IPR038071 -
Apr4g1441 793 PANTHER COBALAMIN-INDEPENDENT METHIONINE SYNTHASE 31 793 - -
Apr4g1441 793 Gene3D - 420 788 IPR038071 -
Apr4g1441 793 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 31 793 - -
Apr4g1441 793 CDD CIMS_N_terminal_like 33 397 - -
Apr4g1441 793 Coils Coil 490 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1441 Apr-Chr4 14735140 14739771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1441 K00549 - gmx:100802039 1448.72