Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1428 ATGTATCTCCCCCGCCACATATTCACCAGAGTCTCTCTGCATCGCCGCCTCTTCTCCCATTCCGCCTCCGCCGCCATCCTCCACCCTCCCGAGGCTGAGCCGTTAACGTACCTGGAAGGGTTTCCTCGTCCCAATCCCAAGTACGACGAGACGATCCTCGCTATTCCTCGCATTGACTCGGGGAAGAACATCTCGGAGAAGGAGCGTAGGGCAGGGCGCGTGCCGAGCATCGTTTTCGAGCAAGAGGACGGACAACACGGCGGCAACAAGCGTCTCATCTCCGTTCGCTCCGATCAGATCAGAAAACTAGTGAACCACCTTGGTCGCTCCTTCTTCCTCTCTCGCCTCTTCCATCTCGAGGTTCGCTCCCAATTTGACATCGACGACGTCGTCGAGAGTGTTCGCGTTTTGCCTCGCAAGATTCATTTGAAAGCTGGTTCAGACGCACCGTTAAATGTCACCTTCATAAGGGCTCCATCACATGCTTTGTTGAAAGTTGACGTTCCTCTTGTATACAGAGGAGAAGATGTTTCGCCTGGACTCAAGAAAGGTGCTTCTTTGAATACCATCAAAAGGACTGTGAAGTACCTATGCCCTGCAGACATTATTCCCCCATATATTGATGTGGATTTAAGTGAGTTAGATGTAGGGCAGAAGGTGGTGATGGGAGATCTCAAAGTTCACCCTGCATTAAAACTTCTTCAGTCAAAAGATGAAGCTGTTTGTAAAATTATGGGTCAAAGGGTTTCTGAACTACAAAAGAAATCTAAGTAA 774 0.4961 MYLPRHIFTRVSLHRRLFSHSASAAILHPPEAEPLTYLEGFPRPNPKYDETILAIPRIDSGKNISEKERRAGRVPSIVFEQEDGQHGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLEVRSQFDIDDVVESVRVLPRKIHLKAGSDAPLNVTFIRAPSHALLKVDVPLVYRGEDVSPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVVMGDLKVHPALKLLQSKDEAVCKIMGQRVSELQKKSK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1428 257 Pfam Ribosomal L25p family 54 155 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Apr4g1428 257 Gene3D Ribosomal Protein L25; Chain P 51 158 IPR020056 -
Apr4g1428 257 Pfam Ribosomal protein TL5, C-terminal domain 164 246 IPR020057 -
Apr4g1428 257 CDD Ribosomal_L25_TL5_CTC 51 157 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Apr4g1428 257 Gene3D Ribosomal protein L25, beta domain 162 253 IPR037121 -
Apr4g1428 257 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 14 255 - -
Apr4g1428 257 SUPERFAMILY Ribosomal protein L25-like 57 246 IPR011035 GO:0006412
Apr4g1428 257 PANTHER BNAA01G13300D PROTEIN 14 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1428 Apr-Chr4 14467929 14471857 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1428 K02897 - gmx:100809143 436.802