Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1425 ATGGGTGTTTCGGTTGGTTCACAATCTGAAAAGGTTTCAAGGTGTTCCTTGAAGTTTTTGACTAGAAGGAAGCAGGTTGATTCTGCATGTAGGAACACAGAGGCTTTGCTTGCCAGGGAGTTAACGGTTCCTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTCTGGTGGGAACAGTTGCACGAGAGCATGCTGGACCCGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCAGCTGCTCTTTCTGCCTTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGCAGTGCATATCACTATTCATATATATGTCTGGGAGAAGGTGTTGCTTGGTTGATTGGCTGGGCCTTGATACTGGAATATACAATTGGTAGCGCTGCTGTTGCTCGTGGCATAACTCCCCATCTGGCTGCACTCTTTGGTGGTGTCGACAATTTACCCCTCTTTTTATCGCGCCAGCATATTCCTGGGATAGATATTGTTGTGGACCCTTGTGCAGCAATTTTGGCATTAGTTGTTACCGGGCTCTTGTGCGTGGGGATCAAGGAGAGTACAGTGATACAAGGCATAGTGACATCATTGAATGTATGTGCATTGCTTTTTGTCATAGTGTTTGGTGGTTACGTGGGATTCAAGTCTGGATGGGGTGGATATGAACTTCCTATGGGGTTTTTTCCTTTTGGCTTTGATGGGATGCTGGCTGGTTCTGCAACAGTATTTTTTGCATATATAGGTTTTGATGCAGTTGCTAGCACTGCTGAAGAGGTGAAAAATCCTCAACGAGATTTACCCCTTGGTATTGGTGGTGCACTGTTTCTTTGTTGTGGACTGTATATGATGGTGTCAATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACCCCAATATCCTCTGCATTTGTTGAACATGGGATGCAATGGGCAGCTTACATTATAAATGCTGGAGCTTTCACAGCTCTGTGCTCAGCATTGTTGGGTGGGATACTTCCCCAGCCACGAATATTGATGTCTATGGCAAGGGATGGGCTACTACCTCCATTTTTTTCTGACATCAATAAGCAGAGTCAGGTTCCTGTTAAAGGCACAATAGCTACTGGCGCTTTGGCTGCCGTCTTGGCATTTTCTATGGAAGTCTCTCAACTGGCAGGGATGGTTAGTGTGGGTACGCTTTTAGCATTCACTGTGGTGGCAATATCTGTTTTGATCCTAAGATATATCCCTCCAGATGAAGTCCCATTGCCTCCTTCCCTCCTGAATTCGATTGATTCAGTGTCAAAGAAGTATAGCTTGAGCAATGTAGATACAGATGTTGGTACTAGTGAGGATACAGCACCTTTAATTGTTAACGAGGATGTTTCGATTGATCATCCTCTTATTGCTAAACATCTTGCTGTAGTCAAACATCTAACCGAAGGTAATAGGCGAAGAGTCACTGGGTGGAGCATAGCATTCATAAGCTTTGGGGCGTTTATCCTTACATATGCAGCTTCAGATTTGACTCTTACTAGTTCTGTTCGCTTTTCAATGGGTGGAGTTGGTGGTTTTCTTCTTTTGTCTGGTTTCGTTTACCTAACCTACATAGATCAAGATGATGCAAGACACAACTTTGGGCACTCTGGAGGTTTCACTTGCCCATTGGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAACTCCTACTTACTTGTTAGTCTTGGAGATGGTGCATTGTTGCGGGTTTCTATATGGCTGGCGACAGGACTATTAGTTTATTTGTTTTATGGCCGAACCCATAGCACTCTAAAAGATGCAATTTATGTGCCAGCAAAGCAAGTGGGTGAAATTTGCCAGACTTCCAAAAACTCTGTTGCCTAA 1893 0.4422 MGVSVGSQSEKVSRCSLKFLTRRKQVDSACRNTEALLARELTVPHLIAVGVGSTIGAGVYVLVGTVAREHAGPALAISFLIAGLAAALSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWALILEYTIGSAAVARGITPHLAALFGGVDNLPLFLSRQHIPGIDIVVDPCAAILALVVTGLLCVGIKESTVIQGIVTSLNVCALLFVIVFGGYVGFKSGWGGYELPMGFFPFGFDGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGALFLCCGLYMMVSIVVVGLVPYYAIDPDTPISSAFVEHGMQWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFFSDINKQSQVPVKGTIATGALAAVLAFSMEVSQLAGMVSVGTLLAFTVVAISVLILRYIPPDEVPLPPSLLNSIDSVSKKYSLSNVDTDVGTSEDTAPLIVNEDVSIDHPLIAKHLAVVKHLTEGNRRRVTGWSIAFISFGAFILTYAASDLTLTSSVRFSMGGVGGFLLLSGFVYLTYIDQDDARHNFGHSGGFTCPLVPLLPIACILINSYLLVSLGDGALLRVSIWLATGLLVYLFYGRTHSTLKDAIYVPAKQVGEICQTSKNSVA* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1425 630 Gene3D Amino acid/polyamine transporter I 472 619 - -
Apr4g1425 630 Gene3D Amino acid/polyamine transporter I 37 434 - -
Apr4g1425 630 PANTHER PROTEIN, PUTATIVE-RELATED 13 617 - -
Apr4g1425 630 Pfam Amino acid permease 45 423 IPR002293 GO:0016020|GO:0022857|GO:0055085
Apr4g1425 630 Pfam C-terminus of AA_permease 555 605 IPR029485 -
Apr4g1425 630 PIRSF AA_transporter 18 426 - -
Apr4g1425 630 PIRSF AA_transporter 476 616 - -
Apr4g1425 630 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 13 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1425 Apr-Chr4 14407478 14418857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1425 17 630 Organic Solute Cotransporters AT5G36940 65.056 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1425 K13863 - gmx:100784895 1002.66