Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1416 ATGGGCATCAAAATCTTCATGGTTTCCTTCATGGTAACCTCAATATTGTTCTTTCTGCTCTTCATTCCCACTAGATTAACCATACAAATCGCCAGCCTCAGGCCTAATATGAACTACTTGAGTGTCCCTACTAGAAGTAGCAAGGCTTACCCGGCCACTTTTGCCTACCTGATCTCGGCATCAAAAGGAGATGTTGTGAAGCTCAAAAGGTTGCTGAGGGTGTTGTATCATCCAGGGAATTACTATTTGATTCATATGGATTATGGGGCTCCAGAGGCTGAGCATAGGGATGTGGCAGAATATGTGGCTAATGATCCTGTTTATGGTCAAGTGGGGAATGTTTGGATTGTGGGCAAGCCTAATTTGGTCACATACAGAGGACCAACCATGCTTGCTACCACTCTCCATGCTATGGCAATACTTCTCAGGACATGCCACTGGGATTGGTTTATTAATCTTAGTGCATCTGATTATCCCTTGGTTACACAAGATGATCTGATCCAAGCGTTTTCTGAGTTGCCAAGGGGTGTTAATTTCATACAGCACACCAGTCAATTGGGTTGGAAATTGAGCAAGAGAGGGAAGCCAATAATCATAGACCCGGGGCTTTATAGTCTCAATAAATCAGATATTTGGTGGGTTATTAAGCAGAGGAGTCTACCAACATCTTTTAAGCTTTACACAGGTTCAGCTTGGACAATACTATCAAGATCGTTCGCCGAGTATTGCATCGTGGGCTGGGAAAATTTGCCAAGGACACTCCTCCTCTACTACACAAACTTTGTGTCATCACCAGAAGGGTATTTCCAAACAGTTATATGCAACTCTGAGGACTACAAGAACACCACTGTTAACCATGATCTCCACTACATTACTTGGGACAATCCTCCAAAACAGCATCCTAGGTCTCTAGGACTTAAGGATTATAGGAAAATGGTTATGAGTAGCCGTCCTTTTGCTAGAAAATTCAAGAGAAATGACCCAGTTCTTGATAAAATTGATAGAGAGCTTCTTAAGAGGTATCATGGGCAATTTTCTTTTGGTGGATGGTGCTCTCAGGGTGGAAAGCATAGAACATGTTCAGGTTTGAGAGCTGAGAATTATGGTGTGCTCAATCCTGGTCCATCCTCTAGAAGGCTAAAAAATTTGCTAACAAAGCTTCTCTCTGATAGATTTTTTCACAAACAACAGTGCAGGTAA 1200 0.4233 MGIKIFMVSFMVTSILFFLLFIPTRLTIQIASLRPNMNYLSVPTRSSKAYPATFAYLISASKGDVVKLKRLLRVLYHPGNYYLIHMDYGAPEAEHRDVAEYVANDPVYGQVGNVWIVGKPNLVTYRGPTMLATTLHAMAILLRTCHWDWFINLSASDYPLVTQDDLIQAFSELPRGVNFIQHTSQLGWKLSKRGKPIIIDPGLYSLNKSDIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSEDYKNTTVNHDLHYITWDNPPKQHPRSLGLKDYRKMVMSSRPFARKFKRNDPVLDKIDRELLKRYHGQFSFGGWCSQGGKHRTCSGLRAENYGVLNPGPSSRRLKNLLTKLLSDRFFHKQQCR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1416 399 Pfam Core-2/I-Branching enzyme 54 312 IPR003406 GO:0016020|GO:0016757
Apr4g1416 399 PANTHER GLYCOSYLTRANSFERASE 1 398 IPR044610 GO:0015020
Apr4g1416 399 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1416 Apr-Chr4 14248152 14251612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1416 54 399 Glycosyltransferase AT4G27480 58.501 1.15e-153 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1416 - - gmx:100812712 759.214