Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1405 ATGGCCACCAAGCTGGTTTTGCAGAGAAGGCTCCTCAGATTTTTGCTACAGTCACCAACTTCCTCCATCTATATGGCTCCATTCCGTACTATAAAAGCTTCACCATTTGTGTCTCTCCTCAGGGGGAATGCCTGTCTTCCGCCTCTCTCCTCTTCTTCTAGAAACTTTTGCTCTCACAGTTCAAATCTTCCTGATGAATCTCAAGGCCCCATGACTATTGATTACCGTTCTCTACTACAGGAGGGTGAATTCCACAAACTGGCTGATTCTACAATACATAACCTGCAAGAGAAATTAGAGGACTACGGAGACTCAGTTGAAGTTGATGGATTTGACATAGATTATGGGAATGATGTTTTGACTGTAAAATTTGGCGATCTTGGAACCTATGTATTGAACAAACAAACACCAAATAGACAACTTTGGCTGTCTTCCCCAATGAGTGGTCCATCAAGGTTTGATTGGGATCAGGATACTAAAGCTTGGATTTATAGGCGGAACAAGGCAAACCTGTATAAAATTTTGGAAGATGAGTTAGAGCAATTGTGTGGCAAACCCATTGTTCTTTCCTGA 573 0.4206 MATKLVLQRRLLRFLLQSPTSSIYMAPFRTIKASPFVSLLRGNACLPPLSSSSRNFCSHSSNLPDESQGPMTIDYRSLLQEGEFHKLADSTIHNLQEKLEDYGDSVEVDGFDIDYGNDVLTVKFGDLGTYVLNKQTPNRQLWLSSPMSGPSRFDWDQDTKAWIYRRNKANLYKILEDELEQLCGKPIVLS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1405 190 SMART Frataxin_Cyay_2 79 190 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 TIGRFAM FeS_CyaY: iron donor protein CyaY 81 188 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 PRINTS Frataxin signature 79 97 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 PRINTS Frataxin signature 117 132 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 PRINTS Frataxin signature 132 147 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 ProSitePatterns Frataxin family signature. 131 145 IPR020895 -
Apr4g1405 190 ProSiteProfiles Frataxin family profile. 79 187 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 TIGRFAM mito_frataxin: frataxin 83 180 IPR017789 GO:0004322|GO:0005739
Apr4g1405 190 Gene3D Frataxin/CyaY 71 190 IPR036524 GO:0008199|GO:0016226
Apr4g1405 190 CDD Frataxin 79 187 - -
Apr4g1405 190 Pfam Frataxin-like domain 80 186 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 PANTHER FRATAXIN 48 188 IPR002908 GO:0008199|GO:0016226
Apr4g1405 190 SUPERFAMILY Frataxin/Nqo15-like 69 187 IPR036524 GO:0008199|GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1405 K19054 - gmx:100815916 296.589