Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1403 ATGTTCTTGTCTTTACCAGTTTCATCACCAAAATGGTTGAGCTTTTGTACTGCACTACTCAACTCGATTCTATGTTGTGTTGTTTTCCTCATATTTGATCTTCTTGATGCTGTCTTCTGCGTTATCTATAGATACCTTGATGAACGCATTGAAGGGGAGCCTTCACCTTGTTGCTGCTCTCACCGAGCAAGGCAAAAGAAGATGAATGTGACCGATGATGATGATGGTGTATCAGATAGTTTATATGAAAGGAAGAACATTTTCAGAGAAATGGGGTTCCTTCAATTTGGGAGAAAAAGGGAAGATTCCAATAGAAAATATGGTAGAGATGGTGAAAAGTCAGTGAAGTCTTGGTCTGATTGTGGCTGTGAGTCTTGCCTTTCATGGGTGAATGATGAAAGCGACTATAAACTTCATTTTGTCGTGAAAGAACCCTTAATGGCCAGTGATGAGAACTTGAGTGGAAGCCCTTTTGAGAATGTTATATTTTTGCATGGATTTCTATGTTCTTCCTCATTTTGGACTCAGACAGTGTTTCAATATTTCCCTGATGAAGTGAATCATGAGTACAGATTAATTGCCATTGACCTGCTGGGATTTGGCAAGAGTCCAAAGCCAAGAGATTGCTTGTATACTTTGAAGGATCATGTGGAAATGATAGAGAAATCTGTGGTTCATCCTTTGCAGTTAAGTAGTTTTCATTTGGTTGCACACTCTATGGGTTGCATAATTGCATTGGCCTTGGCAGCAAAGTACCCCGAGTGTGTAAAATCAATCACCCTTGTTGCGCCTCCATATTCTTCTTCTGAGGGAAATGATGCTTGTATAAATGCACTATCAAAGCTTGCTGGAAAGAAATTGTGGTCCCCATTGTCATTTGGTTCTTCATTTATGTCATGGTATGAGCACTTGGGTCGAACCGTTTGCCTAGTCTATTGCCGAAATCACAGGATATGGGAGAGCATTCTACAATTCATTACTTGCAAGAGGAATCTTCATTTCTTGACCATAGACTTGACTAGGCACACCCATCATTCAGCTTGGAGTTCCATGCATAATGTGATATGTGGGGGAGCAAAATTTGTGGATAGTTACTTGTCAATTTTGACCAGAGTTGGGGTCAAAATAACTGTTATTCAAGGTGATAAAGATCAAGTTGTCCCAATGAAGTGCTGCAGTAACTTCAAGTTGAAGGCTCCAAATGCTCAAATCAACGTCATTCCAAATGCAGACCATGGCACTGTACTATTCGGCAGAGAGAAGGAATTTGCAAGTAGTCTGGAACATATATGGGCATCTTCTTGTTGA 1308 0.4029 MFLSLPVSSPKWLSFCTALLNSILCCVVFLIFDLLDAVFCVIYRYLDERIEGEPSPCCCSHRARQKKMNVTDDDDGVSDSLYERKNIFREMGFLQFGRKREDSNRKYGRDGEKSVKSWSDCGCESCLSWVNDESDYKLHFVVKEPLMASDENLSGSPFENVIFLHGFLCSSSFWTQTVFQYFPDEVNHEYRLIAIDLLGFGKSPKPRDCLYTLKDHVEMIEKSVVHPLQLSSFHLVAHSMGCIIALALAAKYPECVKSITLVAPPYSSSEGNDACINALSKLAGKKLWSPLSFGSSFMSWYEHLGRTVCLVYCRNHRIWESILQFITCKRNLHFLTIDLTRHTHHSAWSSMHNVICGGAKFVDSYLSILTRVGVKITVIQGDKDQVVPMKCCSNFKLKAPNAQINVIPNADHGTVLFGREKEFASSLEHIWASSC* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1403 435 PANTHER HYDROLASE 32 434 - -
Apr4g1403 435 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 4-RELATED 32 434 - -
Apr4g1403 435 Gene3D alpha/beta hydrolase 130 433 IPR029058 -
Apr4g1403 435 Pfam alpha/beta hydrolase fold 161 266 IPR000073 -
Apr4g1403 435 PRINTS Alpha/beta hydrolase fold signature 189 204 IPR000073 -
Apr4g1403 435 PRINTS Alpha/beta hydrolase fold signature 235 248 IPR000073 -
Apr4g1403 435 PRINTS Alpha/beta hydrolase fold signature 249 262 IPR000073 -
Apr4g1403 435 SUPERFAMILY alpha/beta-Hydrolases 155 416 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1403 Apr-Chr4 13974820 13977079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1403 15 433 Acyl Lipid Metabolism Gene Families AT5G17780 51.179 4.41e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1403 - - gmx:100775258 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1403 4 13974820 13977079 Apr4g1403 4 13974820 13977079 ECH