Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1401 ATGGGAGATAGAACCGTGTCAACCTCTACCATCAAGGTTGTTTCTAGAAAGTCCTTGTGCTGTTTCTTCGCAATGACAACGTTGTTGTTCGTGTTGTCATGGTTGTTCATTCTGCGTTCCACCAGTTCCACTCATCAAAATCCAACCCTTTTCTCTTCCTTTAGTGACTCAGATTCTGATCAGGTGCGTGACAAAACCGTGGAACCCTCATTTAGCAATAGAGCAATACTCGTGGACAACGAAAAAGAAGATGAGAAACAACTACAAGAACCTAAAGAAGAAAAAGGTGTGAATTGCATGGCACGTGACAAAACTCTTCTGAAAGTTTTCATGCATGATTTGCCTTCTGAGTTCCATTTTGGACTTTTGGATTGGAAACCTGAAGGAAACAGTGTTTGGCCAGATATAAGAACTAAAATACCCAGTTACCCTGGAGGGTTGAATTTGCAGCATAGTATAGAGTATTGGCTTACTTTGGATCTTCTTGCGTCAGAACTACCTGAAGGCTCCAGTGCTAGGAGTGTAATTAGAGTTAGAAACTCAAGTGAATCTGATGTTATTTTTGTGCCATTCTTTTCTTCTTTGAGTTATAACCGGTGCTCAAGAACTAGTCCACATGAAAAGAAGAGCAAGAACAAGGTGTTGCAAGATAAGTTGGTGAAGTATTTGACAGCTCAAGGGGAATGGAAGAGATCAGGGGGAAGGGACCATGTGATCTTGGCTCATCATCCAAATAGTATGTCGGATGCGAGAATGAAGTTGTGGCCTGCTACCTTCATACTCTCAGATTTTGGGAGGTACCCTCCCAACATAGCCAATGTTGAGAAAGATGTGATTGCACCTTATAAACATGTAGTTGCACCCTATGTCAATGATCAATCCACCTTTGATAGCCGTCCATTATTGCTCTACTTTCAAGGAGCAATACATAGAAAAGATGGAGGTCATGTACGGCAAGAACTATTTAATCTTTTAAAACATGAAAAAGATGTGCATTTTTCATTTGGGAGTGTTAAAAAAGGTGGAGTAAAAAAGGCCACTGAAGGCATGCGATCTTCCAAGTTCTGCCTCAACATAGCTGGTGACACCCCTTCATCAAACCGCTTGTTTGATGCAATTACTAGCCACTGTGTTCCTGTTATCATCAGTGATGAAATTGAGTTGCCATATGAGGATGTGCTTGACTACTCTCAATTTTGCATATTTGTTCGTACAAAGGATGCTCTCAAAAAGAAGTTTCTGATAAACTTCATTAGGAGTATTGACAAGGATGAGTGGACTAGAATGTGGAACATGTTGAAAGAGGTTCAAAGTTTCTTTGAGTTTCAGTTCCCATCTAGGGAAGGTGATGCTGTCCAAATGATTTGGCAAGCTGTTGCACGTAAGGTTCCTTTCATGAAATTGAAAACAAACAGGTCTAGAAGGTTTTTCAGGTCTCTCTATGGTACTAAATTTTTGTGA 1461 0.4045 MGDRTVSTSTIKVVSRKSLCCFFAMTTLLFVLSWLFILRSTSSTHQNPTLFSSFSDSDSDQVRDKTVEPSFSNRAILVDNEKEDEKQLQEPKEEKGVNCMARDKTLLKVFMHDLPSEFHFGLLDWKPEGNSVWPDIRTKIPSYPGGLNLQHSIEYWLTLDLLASELPEGSSARSVIRVRNSSESDVIFVPFFSSLSYNRCSRTSPHEKKSKNKVLQDKLVKYLTAQGEWKRSGGRDHVILAHHPNSMSDARMKLWPATFILSDFGRYPPNIANVEKDVIAPYKHVVAPYVNDQSTFDSRPLLLYFQGAIHRKDGGHVRQELFNLLKHEKDVHFSFGSVKKGGVKKATEGMRSSKFCLNIAGDTPSSNRLFDAITSHCVPVIISDEIELPYEDVLDYSQFCIFVRTKDALKKKFLINFIRSIDKDEWTRMWNMLKEVQSFFEFQFPSREGDAVQMIWQAVARKVPFMKLKTNRSRRFFRSLYGTKFL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1401 486 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 8 477 IPR004263 GO:0006486|GO:0016757
Apr4g1401 486 Pfam Exostosin family 106 416 IPR040911 -
Apr4g1401 486 PANTHER EXOSTOSIN FAMILY PROTEIN 8 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1401 Apr-Chr4 13949440 13951805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1401 - K22846 gmx:100816974 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1401 4 13949440 13951805 Apr4g1401 4 13949440 13951805 ECH