Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1395 ATGAATCCTCTGATACAAGGTTGTTGCATCACCCTTTGGGTTGTTGTTGGACTCTCTTCCTTAGCATTTACAAAGTCAGTGGATGTTTCAAAACAGTGCCAATTCCCTGCCATTTTCAACTTTGGTGACTCAAATTCTGACACTGGAGGCCTCTCTGCTGCCTTTGGACAAGCTGGCCCTCCTCATGGAGAGTCCTTCTTCCATCACCCTTCTGGCCGCTACTGTGATGGCCGTCTCATTATTGATTTTATAGCTAAGAAGCTGGGCCTGCCTTATTTGAATGCATTTCTTGATTCGGTTGGGTCAAATTTTAGACATGGAGCCAACTTTGCAACTGCTGGATCCACCATTAGACCCCAGAATACAACTCTTCATCAAACTGGGGGTTTCAGCCCTTTCTCTTTGGATGTTCAATTCAATCAATTTAGTGATTTCCAGCGCAGAACACAAATTTTTCGCAATAAAGGTGGAGTGTATAAAAAATTGTTACCAAAAGCAGAAGATTTTTCTCGCGCATTGTACACATTTGATATTGGTCAGAATGACTTGACATCTGGTTATTTCCACAACATGTCCACGGATCAAGTTAAAGCATATGTTCCTGATGTTTTGGCTCAATTCAAGACCGTAGTCAAGTATGCGTATGATCATGGAGGAAGATCATTTTGGGTTCACAATACGGGTCCTGTTGGGTGTTTGCCATACATCATGGATCTTCACCCAGTAAAAGCATCTTCACTGGACAAAGCAGGATGTGTAACCCAATATAATGAAGTGGCTCAGTTCTTCAATCGTGAATTAAAAGTTGCTGTGTTTCAACTTAGAAAACAACTTCCCTTGGCTGCCATAACATATGTTGATGTTTATTCAGCCAAGTACTCTCTCATTAGCCAAGCAGGGAAGCATGGTTTTAAGGAACCTCTAAGAGCTTGTTGTGGGCACGGTGGGAAGTACAACTACAATGTACACATTGGATGTGGAACTAAGATTAAGATAAATGGCACAGAGATCCTTGTGGGAAAATCATGCAAAGACCCATCAGTTAAAATTAATTGGGATGGTGTTCATTACACTCAGGCTGCAAACAAATGGGTATTCGATAAAATCGTAGATGGTTCATTTTCTGATCCACCTATTCCTTTGAACTTGGCTTGTCATAAGCATATTTGA 1170 0.4128 MNPLIQGCCITLWVVVGLSSLAFTKSVDVSKQCQFPAIFNFGDSNSDTGGLSAAFGQAGPPHGESFFHHPSGRYCDGRLIIDFIAKKLGLPYLNAFLDSVGSNFRHGANFATAGSTIRPQNTTLHQTGGFSPFSLDVQFNQFSDFQRRTQIFRNKGGVYKKLLPKAEDFSRALYTFDIGQNDLTSGYFHNMSTDQVKAYVPDVLAQFKTVVKYAYDHGGRSFWVHNTGPVGCLPYIMDLHPVKASSLDKAGCVTQYNEVAQFFNRELKVAVFQLRKQLPLAAITYVDVYSAKYSLISQAGKHGFKEPLRACCGHGGKYNYNVHIGCGTKIKINGTEILVGKSCKDPSVKINWDGVHYTQAANKWVFDKIVDGSFSDPPIPLNLACHKHI* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1395 389 PANTHER BNAA06G32900D PROTEIN 32 387 - -
Apr4g1395 389 Gene3D SGNH hydrolase 23 372 IPR036514 -
Apr4g1395 389 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 32 387 - -
Apr4g1395 389 Pfam GDSL-like Lipase/Acylhydrolase 38 369 IPR001087 GO:0016788
Apr4g1395 389 CDD SGNH_plant_lipase_like 36 373 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1395 Apr-Chr4 13908686 13912754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1395 36 388 Acyl Lipid Metabolism Gene Families AT4G10950 29.781 1.87e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1395 - - gmx:100819985 692.575