Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1392 ATGGGAGACGAGATAAAGGAGAAGCTTTTACATAAGCAAAACAATTCTTTAGAGGGTGTTGAAGAGGAAGAGTCTTTGAGGAAAAGGGTATGGGAAGAAAGCAAGAAGATGTGGGCGGTGGCAGGCTCTGCCATATTCACAAGGTTTTCAACTTTTGGAATCACTGTAGTTAGCCAATCCTTCATTGGCCATATTGGCTCCACTGAACTAGCAGCCTATGCACTTGTTATGACTGTCCTTGTCAGGTTTGCAAATGGTGTATTGATTGGAATGGCAAGTGCACTGGAAACTCTTTGTGGGCAAGCATATGGGGCAAAAAAGTATGAAATGCTTGGAGTGTATCTTCAAAGATCCTGGATAGTCTTGTTCTTGACCTCTATGTTTCTTCTTCCTATTTACATTTTTACAACTCCATTGTTAGAGGCTCTAGGCCAAGAAAAAAGAATTGCTCAAGTTGCTGGAAGCATTTCTCTTTGGTCAATAGGTGTGGTATTTGCTTTCTCTGTGTCATTCACTTGCCAAATGTTCCTACAAGCACAAAGCAAGAACAAGATTATTGCCTACCTAGCAGGAGTTTCAATTTCATCTCATATTTTTATGTCGTGGCTTCTAACTGTTAAGTATGAGTTTGGGCTCAATGGTGCTATGACCTCAACACTTATGGCACATTGGATTCCAAACTTGGGCCAACTTGTGTATATCATGAATAAGTGCCCTGACACATGGAAGGGCTTCTCATATTTGGCCTTCAAAGATCTCTGGCCTGTTGTCAAGCTTTCGGTGTCTTCTGGAGTTATGTTATGTCTTGAGATCTGGTACAACACAGTTTTGATTCTCCTAACAGGAAACATGAAAAACGCGGAGGTTTCTATTGATGCTCTTGCCATATGCCTTAACATTAGTGGGTGGGAAATGATGATAGCCCTAGGCTTCTTTGCTGCAGCAAGTGTCCGGGTTGCAAATGAGCTTGGAAGAGGGAGCGCAAAGGGTGCAAAATTTTCAATTGTAATAACAGTTCTGACATCATTGAGCATTGGGTTGGTGCTGTTCTTGGTGTTCTTGTTGCTGAGGGAAAAACTTGCTTACATTTTCACTCCACACCCTCTGGTGGCTCAAGCAGTTGCTGATTTATCACCTTTGCTCTCATTTTCCATCTTGTTGAACAGTGTCCAACCTGTCCTCTCCGGAGTCTCTGTTGGAGCTGGGTGGCAAAGCGTTGTAGCATATGTTAACATAGGCTGTTATTACCTGATTGGTATCCCTGTAGGAGTGGTGCTTGATAACCTTCTCCATTTGCAAGTGAAGGGTGTTTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACTGTGATGCTTATTACAATCACTTTTAAAACTGATTGGGACAAGCAGGTAGAGATAGCTCGAAATCGTGTTAACAAATGGGCTGTGGTTGAAAACGAAGAATCAAACCACAGATCAAGCTAA 1467 0.4206 MGDEIKEKLLHKQNNSLEGVEEEESLRKRVWEESKKMWAVAGSAIFTRFSTFGITVVSQSFIGHIGSTELAAYALVMTVLVRFANGVLIGMASALETLCGQAYGAKKYEMLGVYLQRSWIVLFLTSMFLLPIYIFTTPLLEALGQEKRIAQVAGSISLWSIGVVFAFSVSFTCQMFLQAQSKNKIIAYLAGVSISSHIFMSWLLTVKYEFGLNGAMTSTLMAHWIPNLGQLVYIMNKCPDTWKGFSYLAFKDLWPVVKLSVSSGVMLCLEIWYNTVLILLTGNMKNAEVSIDALAICLNISGWEMMIALGFFAAASVRVANELGRGSAKGAKFSIVITVLTSLSIGLVLFLVFLLLREKLAYIFTPHPLVAQAVADLSPLLSFSILLNSVQPVLSGVSVGAGWQSVVAYVNIGCYYLIGIPVGVVLDNLLHLQVKGVWIGMLFGTFVQTVMLITITFKTDWDKQVEIARNRVNKWAVVENEESNHRSS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1392 488 PANTHER PROTEIN DETOXIFICATION 19 476 - -
Apr4g1392 488 TIGRFAM matE: MATE efflux family protein 44 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g1392 488 CDD MATE_eukaryotic 33 466 IPR045069 GO:0042910|GO:1990961
Apr4g1392 488 Pfam MatE 265 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g1392 488 Pfam MatE 44 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g1392 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1392 Apr-Chr4 13848811 13853389 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1392 K03327 - gmx:100775619 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1392 4 13848811 13853389 Apr4g1392 4 13848811 13853389 ECH