Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1380 ATGGGACTATCCGTTAATTTCATTTTCAATAACAGTCAAAAAGGATTTGAGGCTGGAGGCCCCAGTGTTCCTTCGAATATTTATCCCTGGTCAATTATTGGAAATGATTCAACCATTCACGTATCAACTGATCGTACCTCTTGTTTTGAGCGTAACAAAGTTGCATTACGTATGGAGGTTCTTTGCAATGGACCCAAATCTTGCCCACCTGGTGGCGTTGGCATCTCTAACCCTGGTTATTGGGGCATGAACATCGAGAAGGGGCACAAGTACAGAGTAGTCTTCTTTGTTAGAGCACTTGGTCCAATTGATCTAGATGTTTCATTGGTGGGGTCGGATAATGGTGTGAAATTGGCTTCAAAGAACATCAAGGCATTTGAACTTTATGTTTCAACGTGGAGAAAGATTGAGACCATACTGGAAGCCAAGGATACGAATCATAATGCAAGTCTTCAAATAACAACAAGCTCCAGAGGGGTTGTATGGTTAGACCAAGTGTCAGCTATGCCTATGGACACATACAAGGGTCATGGTTTCCGGAAGGACCTATTTCAAATGGTGGCAGACCTCAAACCAAAATTTTTCAGATTCCCAGGGGGCTGTTACGTTGAAGGAGAATATCTAAGGAATGCATTTCGGTGGAAAGAAACAGTTGGGCCTTGGGAGGAGAGACCAGGACACTTTGATGATGTTTGGAAGTATTGGACTGACGATGGATTTGGTTATTTTGAGGGCCTCCAATTGTCCGAGGACCTTGGTGCATTGCCAGTCTGGGTTTTTAACGCTGGTCTCAGCCTTAACGATGAAGTTAATACATCTGCCATCGCACCTTTTGTGCAAGAAGCTCTAGATGGTATTGAGTTTGCAAGAGGTTCCCCGAAATCAACATGGGGATCTCTCAGAGCTGCCATGGGACATCCTAAACCATTTGACTTGAGAATTGTTGCCATTGGAAATGAAAACTGTGGCATGTTTAACTATCAAGGAAACTATCTCAAGTTCTACGCTGCTATCAAAAGTGCTTATCCAGATATGCAAATTATTTCAAATTGTGATGGTTCTCAAAACCCGTTAGATCACCCGGCCGATCTCTATGATTTCCATATTTATACAAATGCGAAGGACATGTTTTCCAAGTATACCAAGTTCGATAACGCACCACGATCTGGTCCAAAGGCGTTTGTTAGTGAATATGCTGTTTGGAAGAAAGATGCTGGAGATGGAAGCCTCTTGTCAGCTGTGGCTGAAGCTGCATTCCTCATTGGACTCGAAAAAAACAGTGATGTCGTCCACATGGTCAGCTATGCACCACTCTTTGTAAACTCAAACAACAGGATGTGGACACCAGATGCAATTGTTTTCGACTCTTATCAGCACTATGGAACTCCAAGTTATTGGCTTCAACATCTTTTTATAGAATCAAGTGGAGCAACTTTCCTCAATTCAACACTTGAAACTTCTTCTAACTCTCTTGTGGCCTCTGCAATTGAGTACACATCTTCTCAAGATAAGAAGAATTACATCAGAATAAAGGTCGTAAACTTTGGAAGTGACACCGAGAAGTTTAGAATTTCTATAAATGGATTAAGTTCAAAAGTCCAGCAATCCGGGTCCACAAAAATAGTATTAACATCCTCTAATGTAATGGACGAAAACTCCTTTTCTCAGCCAAACAAGATTGTGCCACAACGAGCTTCACTCGAAAATGCAAGCGAGGACGTGAACGTCGAACTTCTTCCTTATTCTGTTACATCATTTGATCTATTGACTCCTAAACAACCTGGAAATGACGTTGATGTGTACTTGTCTCCTTTAATTGAAGATTTGAAGTTGTTGTGGGATAATGGCATAGAAGTATATGACGGATTTAGAGATGAAAATTTCACGGTGAAGGCAATGTTGTATGGAACTATTAATGACTTTCCTGCATATAGAAATCTTTCTGGTTACAGCATCAAAGGTTGGAAGAAGATGTCAATTTTCTTTCAGTTACCGTACTGGAAATCTTTATACGTAAGACACTTTGTTGATGTTATGCATGTTAAAAATAATGTTTGTGAAAGTGTGATTGGTACATTATTAAACATTGTGGGAAAAAAGAAAGATGGCATCAATGCAAGACTTGACTTGGTGAAGTTAGGAATACGATCCGATTTGTCTCCAGTGAAGAAGGGAAAGCGGACCTTTTTACTGCCAACAACATGTAGCCTGTCTAGATATGAGAAACGTACTTTATGTGAGACTCTTTATTCAGTTAAGGTTCCAGAGGGGTATTCATCAAACATTAAAAGTCTTGTATCACTTAAGGACCTAAAGTTAAAAGGATTGAAGTCTCATGATTGTCATATATTAATAGAGAATTTAATTCTTGTTGCTATACGGTCTATTCTACCCAAGAAGGTTCGCATGACAATCACGAAGTTGTGTTTCTTTTTCAAGGCAATATGTAGCAAAGTGATTGATCCTGGGAGATTACCATGTTTGCAAAACCAAATAGCTGAAACTTTATGTGAGCTGAAAATGTATTTTTTACCATCATTCTTTGATATCATGGTTCATTTGACTATTCACTTGGTGGAAGAGACAAAATTGTGTGGCCCTGCATATATGTGA 2613 0.3976 MGLSVNFIFNNSQKGFEAGGPSVPSNIYPWSIIGNDSTIHVSTDRTSCFERNKVALRMEVLCNGPKSCPPGGVGISNPGYWGMNIEKGHKYRVVFFVRALGPIDLDVSLVGSDNGVKLASKNIKAFELYVSTWRKIETILEAKDTNHNASLQITTSSRGVVWLDQVSAMPMDTYKGHGFRKDLFQMVADLKPKFFRFPGGCYVEGEYLRNAFRWKETVGPWEERPGHFDDVWKYWTDDGFGYFEGLQLSEDLGALPVWVFNAGLSLNDEVNTSAIAPFVQEALDGIEFARGSPKSTWGSLRAAMGHPKPFDLRIVAIGNENCGMFNYQGNYLKFYAAIKSAYPDMQIISNCDGSQNPLDHPADLYDFHIYTNAKDMFSKYTKFDNAPRSGPKAFVSEYAVWKKDAGDGSLLSAVAEAAFLIGLEKNSDVVHMVSYAPLFVNSNNRMWTPDAIVFDSYQHYGTPSYWLQHLFIESSGATFLNSTLETSSNSLVASAIEYTSSQDKKNYIRIKVVNFGSDTEKFRISINGLSSKVQQSGSTKIVLTSSNVMDENSFSQPNKIVPQRASLENASEDVNVELLPYSVTSFDLLTPKQPGNDVDVYLSPLIEDLKLLWDNGIEVYDGFRDENFTVKAMLYGTINDFPAYRNLSGYSIKGWKKMSIFFQLPYWKSLYVRHFVDVMHVKNNVCESVIGTLLNIVGKKKDGINARLDLVKLGIRSDLSPVKKGKRTFLLPTTCSLSRYEKRTLCETLYSVKVPEGYSSNIKSLVSLKDLKLKGLKSHDCHILIENLILVAIRSILPKKVRMTITKLCFFFKAICSKVIDPGRLPCLQNQIAETLCELKMYFLPSFFDIMVHLTIHLVEETKLCGPAYM* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1380 870 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 13 589 - -
Apr4g1380 870 Pfam Domain of unknown function (DUF4218) 815 868 IPR025452 -
Apr4g1380 870 Gene3D Glycosidases 164 471 - -
Apr4g1380 870 Gene3D - 472 589 IPR013780 -
Apr4g1380 870 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 13 589 - -
Apr4g1380 870 Gene3D - 25 163 - -
Apr4g1380 870 SMART alpha_l_af_c 396 582 IPR010720 GO:0046373|GO:0046556
Apr4g1380 870 Pfam Transposase family tnp2 589 656 IPR004242 -
Apr4g1380 870 SUPERFAMILY (Trans)glycosidases 151 479 IPR017853 -
Apr4g1380 870 Pfam Alpha-L-arabinofuranosidase C-terminal domain 397 582 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1380 Apr-Chr4 13686807 13700633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1380 12 589 Glycoside Hydrolase AT3G10740 65.803 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1380 K01209 - gmx:100802745 965.296