Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1379 ATGTCTCTCTCTTTCAAGATATTTCTTCTTTGTTTAGTTTGCTGTGCTTCTGGTTGCTTCGGAGATGCAACACAAATTTCAACATTAGTTGTAGATGGATCCAAAGGTTCAGGGAGACAAATTCCAGATACATTTTTTGGAGCATTTTTTGAGGAGATTAATCATGCTGGCGCAGGGGGATTGTGGGCGGAACTTGTGAGGAACAGAGGATTTGAGGCTGGAGGCCCCAGTGTTCCTTCGAATATTTATCCCTGGTCAATTATTGGAAATGATTCAACCATTCACGTATCAACTGATCGTACCTCTTGTTTTGAGCGTAACAAAGTTGCATTACGTATGGAGGTTCTTTGCAATGGACCCAAATCTTGCCCACCTGGTGGCGTTGGCATCTCTAACCCTGGTTATTGGGGCATGAACATCGAGAAGGGGCACAAGTACAGAGTAGTCTTCTTTGTTAGAGCACTTGGTCCAATTGATCTAGATGTTTCATTGGTGGGGTCGGATAATGGTGTGAAATTGGCTTCAAAGAACATCAAGGCATTTGAACTTTATGTTTCAACGTGGAGAAAGATTGAGACCATACTGGAAGCCAAGGATACGAATCATAATGCAAGTCTTCAAATAACAACAAGCTCCAGAGGGGTTGTATGGTTAGACCAAGTGTCAGCTATGCCTATGGACACATACAAGGGTCATGGTTTCCGGAAGGACCTATTTCAAATGGTGGCAGACCTCAAACCAAAATTTTTCAGATTCCCAGGGGGCTGTTACGTTGAAGGAGAATATCTAAGGAATGCATTTCGGTGGAAAGAAACAGTTGGGCCTTGGGAGGAGAGACCAGGACACTTTGATGATGTTTGGAAGTATTGGACTGACGATGGATTTGGTTATTTTGAGGGCCTCCAATTGTCCGAGGACCTTGGTGCATTGCCAGTCTGGGTTTTTAACGCTGGTCTCAGCCTTAACGATGAAGTTAATACATCTGCCATCGCACCTTTTGTGCAAGAAGCTCTAGATGGTATTGAGTTTGCAAGAGGTTCCCCGAAATCAACATGGGGATCTCTCAGAGCTGCCATGGGACATCCTAAACCATTTGACTTGAGAATTGTTGCCATTGGAAATGAAAACTGTGGCATGTTTAACTATCAAGGAAACTATCTCAAGTTCTACGCTGCTATCAAAAGTGCTTATCCAGATATGCAAATTATTTCAAATTGTGATGGTTCTCAAAACCCGTTAGATCACCCGGCCGATCTCTATGATTTCCATATTTATACAAATGCGAAGGACATGTTTTCCAAGTATACCAAGTTCGATAACGCACCACGATCTGGTCCAAAGGCGTTTGTTAGTGAATATGCTGTTTGGAAGAAAGATGCTGGAGATGGAAGCCTCTTGTCAGCTGTGGCTGAAGCTGCATTCCTCATTGGACTCGAAAAAAACAGTGATGTCGTCCACATGGTCAGCTATGCACCACTCTTTGTAAACTCAAACAACAGGATGTGGACACCAGATGCAATTGTTTTCGACTCTTATCAGCACTATGGAACTCCAAGTTATTGGCTTCAACATCTTTTTATAGAATCAAGTGGAGCAACTTTCCTCAATTCAACACTTGAAACTTCTTCTAACTCTCTTGTGGCCTCTGCAATTGAGTACACATCTTCTCAAGATAAGAAGAATTACATCAGAATAAAGGTCGTAAACTTTGGAAGTGACACCGAGAAGTTTAGAATTTCTATAAATGGATTAAGTTCAAAAGTCCAGCAATCCGGGTCCACAAAAATAGTATTAACATCCTCTAATGTAATGGACGAAAACTCCTTTTCTCAGCCAAACAAGATTGTGCCACAACGAGCTTCACTCGAAAATGCAAGCGAGGACGTGAACGTCGAACTTCTTCCTTATTCTGTTACATCATTTGATCTATTGACAAAGAGTACATTTTTAAAAATTATAGCACAACGGTATCGTTGGAAAAGCAGTGAGCGAAGACAATGTATTGGTGAAGCCACCACGCGCATGAATGCACCTGAGGCAGTGCAGTACCGTTGTTGA 2058 0.4218 MSLSFKIFLLCLVCCASGCFGDATQISTLVVDGSKGSGRQIPDTFFGAFFEEINHAGAGGLWAELVRNRGFEAGGPSVPSNIYPWSIIGNDSTIHVSTDRTSCFERNKVALRMEVLCNGPKSCPPGGVGISNPGYWGMNIEKGHKYRVVFFVRALGPIDLDVSLVGSDNGVKLASKNIKAFELYVSTWRKIETILEAKDTNHNASLQITTSSRGVVWLDQVSAMPMDTYKGHGFRKDLFQMVADLKPKFFRFPGGCYVEGEYLRNAFRWKETVGPWEERPGHFDDVWKYWTDDGFGYFEGLQLSEDLGALPVWVFNAGLSLNDEVNTSAIAPFVQEALDGIEFARGSPKSTWGSLRAAMGHPKPFDLRIVAIGNENCGMFNYQGNYLKFYAAIKSAYPDMQIISNCDGSQNPLDHPADLYDFHIYTNAKDMFSKYTKFDNAPRSGPKAFVSEYAVWKKDAGDGSLLSAVAEAAFLIGLEKNSDVVHMVSYAPLFVNSNNRMWTPDAIVFDSYQHYGTPSYWLQHLFIESSGATFLNSTLETSSNSLVASAIEYTSSQDKKNYIRIKVVNFGSDTEKFRISINGLSSKVQQSGSTKIVLTSSNVMDENSFSQPNKIVPQRASLENASEDVNVELLPYSVTSFDLLTKSTFLKIIAQRYRWKSSERRQCIGEATTRMNAPEAVQYRC* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1379 685 Gene3D - 62 218 - -
Apr4g1379 685 Pfam Alpha-L-arabinofuranosidase C-terminal domain 452 637 IPR010720 GO:0046373|GO:0046556
Apr4g1379 685 Gene3D - 526 644 IPR013780 -
Apr4g1379 685 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 9 645 - -
Apr4g1379 685 SUPERFAMILY (Trans)glycosidases 206 534 IPR017853 -
Apr4g1379 685 Gene3D Glycosidases 219 525 - -
Apr4g1379 685 SMART alpha_l_af_c 451 637 IPR010720 GO:0046373|GO:0046556
Apr4g1379 685 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 9 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1379 Apr-Chr4 13677926 13686639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1379 28 652 Glycoside Hydrolase AT3G10740 66.134 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1379 K01209 - gmx:100802745 1055.05