Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1353 ATGGGTTCATCCAATGCCTCATGCAGTGTTTCTCTGCTCCAATTGTTCATAGTGGTTTGCCTTGTCTTCCAATGCTTTGCTGCTGAAGTACATGCTGACCTGAACGCAACTCTAGTCGTAGATGCTTCTGATACATCTGGAAGGCTAATACCGGAGACACTTTTTGGCATATTCTTTGAGGAGATCAATCATGCTGGAACTGGGGGATTGTGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCTGGGGGCCCTAACACTCCTTCAAATATTGATCCGTGGTCAATTATTGGAAATGAATCAACTATAAATGTCGAAACTGATCGTACCTCTTGCTTTGACCGTAATAAGGTTGCACTTCGTTTGGAGGTGTTATGTGACAGCAATGGTGACAAGATTTGCCCAGCTGATGGTGTTGGTGTGTACAACCCTGGTTTTTGGGGCATGAATATTGAGCAAGGGAAGCAATACAAAGTGATCTTCTATGTTCGTTCAACTGGACCACTTAATCTAACAATTTTATTGACTGGATCAAATGGTGTGGGAAACTTAGCTTCAACTGTGATCACGGGTTCTGCTTCTGATTTTTCAAACTGGACCAAGGTGGAGACTTTATTGGAGGCCAAGGCAACAAATCACAATTCAAGACTTCAATTAACAACAACTACCAAAGGTGTGATATGGTTGGACCAAGTGTCTGCTATGCCAATGGACACATATAAGGGACATGGTTTCCGAAGCGAACTGGTTGAAATGCTGGCAGCTTTGAGGCCAAGATTTATCAGATTTCCGGGTGGTTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCATTTCGTTGGAAAGCATCTGTTGGACCATGGGAGGAGAGACCTGGGCACTTTGGTGATGTTTGGATGTACTGGACTGATGATGGACTTGGCTATTTTGAGTTTCTCCAACTAGCAGAGGACTTGGATGCAGCACCAATATGGGTATTTAATAATGGTGTCAGCCATAATGATCAAGTTGATACATCTGCTGTCTTACCTTTGGTGCAAGAAGCCCTTGATGGAATTGAGTTTGCAAGAGGTGATTCAACTTCAAAATGGGGTTCCCTTAGAGCTGCCATGGGACACCCAGAGCCATTTGACCTAAAATATGTTGCCGTTGGAAATGAAGATTGTGGAAAAAAGAATTATCGAGGAAACTACCTGAAATTCTATAGTGCCATAAGAAGTGCTTATCCAGATATCCAAATTATCTCAAATTGTGATGGGTCTTCTCGACCTTTAGATCATCCAGCTGATATATATGATTATCATGTTTATACAAGTGCAAATGACATGTTTTCTAGGGCTAACACATTTGATCGTGCATCACGAAGCGGTCCAAAGGCTTTTGTAAGTGAGTATGCTGTGACTGGGAAAGATGCTGGAACGGGAAGCCTTTTGGCAGCCCTAGCTGAAGCTGGTTTCCTTATTGGACTGGAAAAGAACAGTGATGTTGTCAAAATGGTTAGCTATGCTCCACTTTTCGTAAATGCCAATGATCGGAGGTGGAACCCAGATGCTATTGTATTCAATTCCTTTCAGCTCTACGGAACTCCTAGCTATTGGGTGCAGCTATTTTTCTCGGAGTCAAGTGGAGCAACACTTCTAAATACATCACTTCAAGCAACTTCCTCAAATTCACTTGTTGCATCAGCAATTAGTTGGCAAAATTCTGTAGATAAGAATAATTACATACGAATAAAGGTTGTGAACTTTGGTGTCAACACTGTGAACCTCAAGATTTCTTTTGATGGACTGGAACCAAACTCATTGCAGTTGTCTGGGTCAACAAAGACTGTGCTTACATCTTCAAATGTAATGGACGAGAATTCCTTCTCACAGCCAAAGAAGGTGGTGCCAATCCAGAGTCTACTTCAAAATGTTGGGAAGGACATGAATGTCACTATCCCACCTCATTCGTTCACATCTTTTGATTTGTTGAAAGAATCAAGTAATCTAAAGATGCCAGGGAGCGATTCTTCGACGAGGTCTTCTATTTAA 2031 0.4205 MGSSNASCSVSLLQLFIVVCLVFQCFAAEVHADLNATLVVDASDTSGRLIPETLFGIFFEEINHAGTGGLWAELVSNRGFEAGGPNTPSNIDPWSIIGNESTINVETDRTSCFDRNKVALRLEVLCDSNGDKICPADGVGVYNPGFWGMNIEQGKQYKVIFYVRSTGPLNLTILLTGSNGVGNLASTVITGSASDFSNWTKVETLLEAKATNHNSRLQLTTTTKGVIWLDQVSAMPMDTYKGHGFRSELVEMLAALRPRFIRFPGGCFVEGEWLRNAFRWKASVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLDAAPIWVFNNGVSHNDQVDTSAVLPLVQEALDGIEFARGDSTSKWGSLRAAMGHPEPFDLKYVAVGNEDCGKKNYRGNYLKFYSAIRSAYPDIQIISNCDGSSRPLDHPADIYDYHVYTSANDMFSRANTFDRASRSGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVVKMVSYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWVQLFFSESSGATLLNTSLQATSSNSLVASAISWQNSVDKNNYIRIKVVNFGVNTVNLKISFDGLEPNSLQLSGSTKTVLTSSNVMDENSFSQPKKVVPIQSLLQNVGKDMNVTIPPHSFTSFDLLKESSNLKMPGSDSSTRSSI* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1353 676 Gene3D Glycosidases 219 538 - -
Apr4g1353 676 SUPERFAMILY Galactose-binding domain-like 73 234 IPR008979 -
Apr4g1353 676 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 672 - -
Apr4g1353 676 Pfam Alpha-L-arabinofuranosidase C-terminal domain 463 650 IPR010720 GO:0046373|GO:0046556
Apr4g1353 676 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 1 672 - -
Apr4g1353 676 SUPERFAMILY Glycosyl hydrolase domain 528 654 - -
Apr4g1353 676 SMART alpha_l_af_c 462 650 IPR010720 GO:0046373|GO:0046556
Apr4g1353 676 SUPERFAMILY (Trans)glycosidases 214 545 IPR017853 -
Apr4g1353 676 Gene3D - 539 656 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1353 Apr-Chr4 13119834 13128823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1353 9 673 Glycoside Hydrolase AT3G10740 70.509 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1353 K01209 - gmx:100806458 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1353 4 13119834 13128823 Apr4g1353 4 13119834 13128823 ECH