Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1349 ATGGCTTCCTTCCCTCCTCCTCGTTCACTCACTCTCTGCGAAGTCAACCGCGAGCTTATCACCGTCGACGCCCTCACCGACGATCGAGCCAACCAAGTCTACGGAAAAATTATTGGATTTGTGTTCAGTCCCGTGCCGTTTCAGCCTCTCGAGAACGATGCTTCCGAATCGGAAGCAACGACAACGACCGCCGGAGAAACCGTTCAGAGGAAAGGCCCCGTGGCACTCGTGCAAGGGCTTATAAATCAGTGTCTCAGACCACTCTTTTACCCTAACGATGTGCATTTGTTGCCTGAGGTTGATCTTCAAGGTGTAAGCTGGCATCCTAATAAGCATATATTTGCTTTTATATCTGGCCCCACCCAAGTTTTAGTTCGTGATTACCAAGACTCTGCTGAGGGGAAAGATCCGATTATTTTGACCAACGAGTCGCAGAGAGATGTTAGAGTGCTTGAATGGAGGCCCAATGGTGGGAGGATGCTTGCTGTCGGTTGCAAGAGTGGGATTTGCATATGGGCTGCTTCTTATCCTGGAAATGCAGCATCTGTTAGATCTGGTGTTGCATTCTTTTTGGGAAGTTTATCTAGAGGCTCAGGGAATCGGTATATCCTGGTTGATTTTCTTCGTAGTCAATATGATGAGCATGTTAGTGCTCTCACTTGGAGTCCAGATGGAAGATACTTAGCTTCTGCTTCATATGAAAGTTCCTCATTCACTGTGTGGGATGTTGCTCAAGGTGTTGGAACACCCATTCGACGGGGATTAGGAGGCATATCAATGCTGAAGTGGTCACCCACTGGAGATTACTTTTTTTCTTCAAAATTTGATGGAACATTTTATCTTTGGGAGACAAACACGTGGACATCAGAACAATGGTCATCAACTAGTGGTTTCGTCAAGGGTGCAACATGGGATCCAGATGGGCGTATGATACTCCTTGCCTTTTCTGAATCATCAACTTTGGGATCTGTTCACTTTGCATCAAAGCCTCCCTCATTAGATGCACATTTGTTACCTGTTGATTTGCCAGAGATATTATCATTGACAGGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGAGAGCGATTGGCTGTGTCTTTTAAAGGTGGAGATGATATATACAAGGGTCTGATCGCCATATATGATACAAGAAGGACTCCTCTCATATCTACATCATTAATTGGATTTATAAGAGGGCCGGGAGATGATCCCAAGCCAATCTCATTTTCATTTCACGGGAAGTTTAAGCAGGGACCATTGCTTTCTGTGTGCTGGAGCAGTGGGTTTTGTTGCACATACCCCCTCTTATTTCGCTGCCACATGCTTCCATGA 1341 0.4556 MASFPPPRSLTLCEVNRELITVDALTDDRANQVYGKIIGFVFSPVPFQPLENDASESEATTTTAGETVQRKGPVALVQGLINQCLRPLFYPNDVHLLPEVDLQGVSWHPNKHIFAFISGPTQVLVRDYQDSAEGKDPIILTNESQRDVRVLEWRPNGGRMLAVGCKSGICIWAASYPGNAASVRSGVAFFLGSLSRGSGNRYILVDFLRSQYDEHVSALTWSPDGRYLASASYESSSFTVWDVAQGVGTPIRRGLGGISMLKWSPTGDYFFSSKFDGTFYLWETNTWTSEQWSSTSGFVKGATWDPDGRMILLAFSESSTLGSVHFASKPPSLDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDDIYKGLIAIYDTRRTPLISTSLIGFIRGPGDDPKPISFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRCHMLP* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1349 446 Gene3D - 83 250 IPR015943 GO:0005515
Apr4g1349 446 ProSiteProfiles Trp-Asp (WD) repeats profile. 258 286 IPR001680 GO:0005515
Apr4g1349 446 Pfam WD domain, G-beta repeat 212 242 IPR001680 GO:0005515
Apr4g1349 446 PANTHER ALADIN/ADRACALIN/AAAS 1 445 IPR045139 -
Apr4g1349 446 Gene3D - 251 434 IPR015943 GO:0005515
Apr4g1349 446 SMART WD40_4 133 173 IPR001680 GO:0005515
Apr4g1349 446 SMART WD40_4 341 385 IPR001680 GO:0005515
Apr4g1349 446 SMART WD40_4 201 242 IPR001680 GO:0005515
Apr4g1349 446 SMART WD40_4 244 283 IPR001680 GO:0005515
Apr4g1349 446 SUPERFAMILY WD40 repeat-like 103 429 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1349 K14320 - gmx:100808599 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1349 4 13066412 13074497 Apr4g1349 4 13066412 13074497 ECH