Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1348 ATGAACCTGTTGTCAAGCTTCAGACACAGGGTCTTCCCACCAACTGTCTCACCCTTTGTCCTCTTCACCCAAAGGAGATGGAAGAAACCTACGGTCTCAGCGCAGACCCGTTTGGAGGACAGGGTAAGGGACCCCTACCTTGACAAGTTCATGACCCACCTTAAAAAACTCAAACTTGTTCTCGAAATCCACCACCTCATGTCAAAACGCAAGCGTGGTGCTTTTGTGTCCCTTCAGCTCATGTCCCGTTGGAGAAACATTTTAGGACTCAATGTACCTATTGGTTCCTTTGTCCACAAATACCCTCACGTTTTTGAGGTGTTTGCGCACCCTCTCAGGAGGAACACGTGTTGTAGGATTACAAGGAAGGTGAAAGAGTTGATCTTGCTGGAAGGGGTTGCTGTGAAGCAGCAGGAGCTGGAGGCTGTGAAGAGCGTCAAGAAGTTGCTAATGATGTCTGTGAATGGCACCCTTCATGTACATGCTTTGAGGTTGATCAGAAGGGAACTGGGTCTTCCTGAGGATTTCAGAGACTCCATTCTTGGCAAGTATAGTGGGGAATTCAGATTGATTGATTTGGAGGTTGTGGCACTGGTGGGTATAGATGATGACTTGGGAGTGGCTCAGGTTGAGAAATGGAGGGAGAAAGAGTATACAGAGAAGTGGTTGAGTGAGTTTGAGACCAAGTTTGCGTTTCCCATCAATTTCCCAACAGGGTTTAAGATTGAGAGAGGCTTCAGAGACAAGTTGAAGAATTGGCAAAGGCTTCCCTATACAAAGCCTTATGAGAGGAAAGAGGTCATTCAGGTTCGAACGTGTGGCGGGATTGAGCGCTATGAGAAGAGGGCTGTTGCTGTTCTTCATGAGCTGTTGAGCCTGACTATGGAGAAAATGGTTGAGGTTGATCACCTGGCTCATTTTCGGAGGGACTTTGCGATTGAAGTTAATGTACGTGAACTATTGTTAAGGCACCCTGGAATATTCTACATATCTACTAAAGGGAAAACTCTAACTGTTTTTCTTAGGGAAGCATATAGGAAAGGGAGTTTGGTTGAGCCTAATCCTGTGTATACAGCTCGAAGGAATATGTCAGACCTAGTATTGTTAGGACGTAGGAAAACGAAACAGTTGTTAGCTTGTGATAAAGTTAAGGAAGAGAAAAATATTGTAGTCCATGAAATATATGAGGAAGGTAAACGACAAGGAGATTGGGTGATTCCTTTCCTGGAGAATTGTGAGGAGAATAGATCCCCATGA 1257 0.4503 MNLLSSFRHRVFPPTVSPFVLFTQRRWKKPTVSAQTRLEDRVRDPYLDKFMTHLKKLKLVLEIHHLMSKRKRGAFVSLQLMSRWRNILGLNVPIGSFVHKYPHVFEVFAHPLRRNTCCRITRKVKELILLEGVAVKQQELEAVKSVKKLLMMSVNGTLHVHALRLIRRELGLPEDFRDSILGKYSGEFRLIDLEVVALVGIDDDLGVAQVEKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFRDKLKNWQRLPYTKPYERKEVIQVRTCGGIERYEKRAVAVLHELLSLTMEKMVEVDHLAHFRRDFAIEVNVRELLLRHPGIFYISTKGKTLTVFLREAYRKGSLVEPNPVYTARRNMSDLVLLGRRKTKQLLACDKVKEEKNIVVHEIYEEGKRQGDWVIPFLENCEENRSP* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1348 418 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 13 415 - -
Apr4g1348 418 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 13 415 IPR045040 GO:0003723
Apr4g1348 418 Pfam Plant organelle RNA recognition domain 42 371 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1348 Apr-Chr4 13054402 13057052 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1348 - - gmx:100789857 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1348 4 13054402 13057052 Apr4g1348 4 13054402 13057052 ECH