Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1345 ATGACTGCTGAGACCCAGGAAGAGCTTCTCGCGCAACACCTCGAACAACAAAAGATCCATCATGACGAGCCTGTAGTTGAAGATGATGATGAGGAGGAGGAGGAGGACGATGATGATGATGAGGATGATGACAGAGATGATAATGCTGATGGTCAAGAAGGTGATGCATCTGGTAGGTCCAAGCAGACCAGAAGTGAAAAGAAGAGCCGCAAGGCAATGCTTAAACTTGGAATGAAACCTGTCACAGGTGTCAGTCGTGTGACAGTCAAGAAGAGCAAGAATATCCTGTTCGTTATCTCTAAACCAGATGTTTTTAAGAGCCCAACTTCTGACACCTACATTATATTTGGGGAAGCTAAGATCGAAGACTTAAGCTCACAGCTACAAACTCAAGCAGCGGAGCAGTTCAAGGCTCCTAATTTGAGTAATGTGGGAATGAAGCCAGAATCTTCTGCTATTGCTCAAGATGATGAGGATGTGGACGAGACAGGTGTAGATCCCAAGGATATAGAGTTGGTGATGACTCAAGCTGGTGTGGCAAGATCAAGAGCTGTTAAAGCTCTCAAAGCAGCCAATGGTGACATTGTTGCTGCCATTATGGAGCTAACTAATTAA 615 0.4488 MTAETQEELLAQHLEQQKIHHDEPVVEDDDEEEEEDDDDDEDDDRDDNADGQEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGMKPESSAIAQDDEDVDETGVDPKDIELVMTQAGVARSRAVKALKAANGDIVAAIMELTN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1345 204 MobiDBLite consensus disorder prediction 141 165 - -
Apr4g1345 204 MobiDBLite consensus disorder prediction 1 75 - -
Apr4g1345 204 Pfam HYPK UBA domain 164 203 IPR044034 -
Apr4g1345 204 ProSiteProfiles NAC A/B domain profile. 63 128 IPR002715 -
Apr4g1345 204 CDD UBA_NAC_euk 167 203 - -
Apr4g1345 204 Pfam NAC domain 66 121 IPR002715 -
Apr4g1345 204 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 204 - -
Apr4g1345 204 MobiDBLite consensus disorder prediction 11 25 - -
Apr4g1345 204 SMART NAC_2 66 122 IPR002715 -
Apr4g1345 204 Gene3D - 72 125 IPR038187 -
Apr4g1345 204 Gene3D - 165 202 - -
Apr4g1345 204 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 204 IPR016641 GO:0005854
Apr4g1345 204 MobiDBLite consensus disorder prediction 26 50 - -
Apr4g1345 204 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1345 Apr-Chr4 13004062 13006694 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1345 K03626 - gmx:100500056 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1345 4 13004062 13006694 Apr4g1345 4 13004062 13006694 ECH