Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1341 ATGGCTGTGGCCATTGATCAACATCATGGATTTAAGCATTTTAGCCGATCCCAGAGATGCAAACTCCAATCCTTTGGTCACATTGATCCCAACATTGTAGAAGTTGGCTTAACTAGTACTTTTTCCCACTCCTTAGAACTAGCAGTAGCAGTTCAAGCCGATAATATTCACCGCAGTGTCTCCACTCCATGCCTCCCCCTATCAGGGGAAGATCTCAGTTCTAACCATCCAAGGGTTGAGATAGTTCGTGGAAGTGGAGCTCCAGTGCATGCTCTAGTTGTTGAGGTTGCAATAGCAATGGCCTCAGGGGTTCAACCAACACCACTCCCAAGTGGCCTAGGTGGTGCCTATGTTTTCCCCAACCAAAGTGGCAACAACATTGCTGTGGCAAAGCCTATAGATGAAGAACCTTTAGCCTTCAACAACCCAAAAGGGTTAGGGGGTCACATGTTGGGCCAACCTGGCCTAAAGAAATCAATTAGGATTGGTGAAACTGGTATAAGAGAATTGGGTGCTTATCTCCTTGATCATGGAGGCATGGCTGGTGTGCCTCCTACTGCTTTAGTGCAATTCTCTCATGCTGCATTTTTCGTTAGTACTGCTACTTCTGCTACTACTGATTCAACCGAAGTCCATCCTCACATGCCTAAAATTGCCTCACTCCAACGCTTTGTTGGTCATGGTTTTGATGCTGGGGAGTTGGGTCCTTCATTCTTCTCAGTTGATTCAGTCCACCATATTGGGATTCTAGACATTAGGATTCTGAATCTTGATAGACATGCAGGGAATATGCTTGTGATGAAACATGAGCACAATAGTACTAGTTATGTTCATCAAGGAGTTTTTGACCTTGTTCCTATTGACCATGGTTTTTGCCTCCCTGAGTGGCTGGATGATCCTTATTTTGAGTGGCTGCATTGGCCACAAGCCTCCATTCCTTTCTCTGAAAATGAACTAGAGTACATTTCCAAACTTGACCCTTTTAAAGATGCAGAGATTTTGAGAACTGAGATTCCTCTATTGAGGGAGTCTTCTATTCGTGTTCTTATAGTTTGCACCATTTTCTTGAAGCATGCTGCTGCTGCTGGCCTTTGTCTTGCTGATATAGGCCAAATGATGACTAGGGAACTTTGTGGTGGTGAAGAATCTGCAAGTGAAATGGAAAATATTTGCTTGCAAGTCAAGGCTCGTGTTTCCAACAATGAGAGATGCAAAGAAGAAACTGAAGGAGGGTCTATTTGTGATGAAACTGGTGGCATTTCCTTTGGAGACCTCAACCAAGGTGAATGGGAATCGTTTTTGGAGATTTTTAATGATCTTTTGCATGCAGTTTTTGAGGAAAAGAAGTGCAAGAATTGA 1359 0.4364 MAVAIDQHHGFKHFSRSQRCKLQSFGHIDPNIVEVGLTSTFSHSLELAVAVQADNIHRSVSTPCLPLSGEDLSSNHPRVEIVRGSGAPVHALVVEVAIAMASGVQPTPLPSGLGGAYVFPNQSGNNIAVAKPIDEEPLAFNNPKGLGGHMLGQPGLKKSIRIGETGIRELGAYLLDHGGMAGVPPTALVQFSHAAFFVSTATSATTDSTEVHPHMPKIASLQRFVGHGFDAGELGPSFFSVDSVHHIGILDIRILNLDRHAGNMLVMKHEHNSTSYVHQGVFDLVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSENELEYISKLDPFKDAEILRTEIPLLRESSIRVLIVCTIFLKHAAAAGLCLADIGQMMTRELCGGEESASEMENICLQVKARVSNNERCKEETEGGSICDETGGISFGDLNQGEWESFLEIFNDLLHAVFEEKKCKN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1341 452 Coils Coil 445 452 - -
Apr4g1341 452 Pfam Phosphatidylinositol 3- and 4-kinase 113 368 IPR000403 -
Apr4g1341 452 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 103 406 IPR000403 -
Apr4g1341 452 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 415 451 IPR044571 -
Apr4g1341 452 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 408 IPR044571 -
Apr4g1341 452 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 1 408 - -
Apr4g1341 452 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 415 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1341 Apr-Chr4 12932063 12933421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1341 1 398 Acyl Lipid Metabolism Gene Families AT2G40850 59.804 1.47e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1341 - - gmx:100809677 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1341 4 12932063 12933421 Apr4g1341 4 12932063 12933421 ECH