Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1304 ATGATAACATTGATAGACTTGTACCACGTTCTAACAGCGGTGGTGCCACTCTACGTGGCAATGATCCTGGCATATGGTTCAGTAAAATGGTGGAAAATCTTCACCCCAGATCAATGCTCGGGCATAAACCGTTTCGTGGCACTCTTCGCAGTCCCACTTCTCTCCTTTCACTTCATCTCCACCAACAACCCTTATGCAATGAACTTTAAGTTCATAGCTGCAGACTCACTCCAAAAAGCCATAGTCTTGTTGGTTCTTTTGGTGTGGTCAAGAACAAGCTCTAGAGGCTCTTTGGAATGGTCCATTACGCTCTTCTCTCTCTCCACACTCCCCAACACGCTCGTCATGGGAATCCCATTGCTGAAGGGCATGTATGGTGATGCCTCAGGGACTCTCATGGTTCAAATCGTGGTTCTGCAGTGCATCATTTGGTACACTCTTATGTTGTTCTTGTTTGAGTATAGGGGTGCGAGGCTTCTCATTGTGGAGCAGTTCCCTGACACTGCAGGTTCAATCATTTCCTTCAAGGTTGACTCTGATATCATCTCTTTGGATGGGAAAGAGCCTCTTCAGACTGAAGCTGAGGTTGGTGAAGATGGGAAGCTTCATGTTACTGTGAGGAAGAGTGCGAGTTCGCGTTCTGAGATATTCTCTCGACGTTCTCAGGGTCCAAACTCCGGGGTTTCGTTGACCCCTCGTCCTTCAAATTTGACCAATGCCGAGATTTATTCTCTTCAGTCTTCGAGGAATCCAACTCCAAGAGGGTCTAGTTTTAATCACACTGATTTTTACTCTATGGTGAACGGGAGGAACGTAAGTCCAAGACAGTCTAATTTTGGAGGTGGTTTTGATGAAGAGAGTGGAAGAGTTAATGGTGGTGGTGGAGCGTACCCTGCTCCTCCTAATGGTGGGTTGTTTTCTCCGGTGACAAAGAATAAGAAGGGGAATGGTGAAGGTGGAAAGGATCTTCACATGTTTGTGTGGAGTTCTAGTGCTTCTCCTGTTTCTGAAGGTGGAATCCATGTCTTCAGAGGTGGTGGGGATTTTGGAAATGACCAGCTTGGTGGGGTGCCTCACCATAAAGAATATGATGATTTTGGTCACGATGAGTTTAGCTTCGGAAACAGAACCGTTGCTAATGGGGTGGACAAGGAAGGGCCAGTACTTTCGAAGCTTGGTTCAAGCTCCACTGCTGAGCTTCATCCAAAAGGTGGGGCACAGGGTGATTCTAAACCCACGTCCATGCCACCTGCTAGTGTTATGACCAGACTCATTTTGATTATGGTGTGGAGAAAGCTTATTAGGAACCCCAACACTTACTCAAGCCTCATTGGTCTCACGTGGTCTTTAATCTCATTCAAGTGGAATGTTGTTATGCCTGCAATTGTTGCTAAATCAATATCAATTTTGTCCGATGCTGGCCTAGGGATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAACCAAGGATAATTGCATGTGGAAACTCGGTTGCTTCCTTTGCTATGGCTGTCCGTTTCCTCACTGGTCCTGCTGTCATGGCCGTTGCTTCAATCGTTGTGGGGCTCAGGGGAGTTCTGTTGCACATTGCTATTGTACAGGCTGCTTTGCCACAAGGGATTGTGCCCTTTGTGTTTGCTAAGGAGTACAACGTTCATCCAGACATACTAAGCACTGGGGTTATATTTGGAATGCTAATTGCTCTTCCTATTACGCTGGTTTACTACATTTTGCTGGGGCTTTGA 1749 0.4637 MITLIDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNFKFIAADSLQKAIVLLVLLVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDIISLDGKEPLQTEAEVGEDGKLHVTVRKSASSRSEIFSRRSQGPNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGRNVSPRQSNFGGGFDEESGRVNGGGGAYPAPPNGGLFSPVTKNKKGNGEGGKDLHMFVWSSSASPVSEGGIHVFRGGGDFGNDQLGGVPHHKEYDDFGHDEFSFGNRTVANGVDKEGPVLSKLGSSSTAELHPKGGAQGDSKPTSMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLISFKWNVVMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1304 582 MobiDBLite consensus disorder prediction 392 415 - -
Apr4g1304 582 Pfam Membrane transport protein 9 577 IPR004776 GO:0016021|GO:0055085
Apr4g1304 582 TIGRFAM 2a69: auxin efflux carrier 1 582 IPR014024 -
Apr4g1304 582 MobiDBLite consensus disorder prediction 213 235 - -
Apr4g1304 582 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 582 - -
Apr4g1304 582 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1304 Apr-Chr4 12205844 12208408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1304 1 573 Organic Solute Cotransporters AT1G73590 65.149 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1304 K13947 - gmx:100820506 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1304 4 12205844 12208408 Apr4g1304 4 12205844 12208408 ECH