Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1299 ATGCTTTATTTCCTTATATCTTTTGTGTCCTTTCTCATTCTCTCCAAGTCCTTTACCAGTAAGCCTTTTTCATCTGGGGAAAGTGGGACCAAACTTGTGTCAAGCGGTTTTTTGGGGGGTCTTTCAAGTTGGCTGGTTTCTCGGCTCAGGAAAGGAAGCAACCCTTCTAGCTTTTTTCAGTTTTCTCTTGGCATGTCGTTGAAAAAGAAGAGTTGTGTATCTAAAGTGGAGAATGGAGAAGAGGAAAGTAAGGTTTCTCTCTTGGATTTGCCTGATTTGCCATTGGAGTGTATCCTTGAGCACCTTTCACCAGCTGAATTATGTAGTTTGGGAACAGTATGCACATCTCTCAGGGAAAGAAGTAGAAGTGATCACTTATGGAACAAACACATGGAAAGGAAATGGGGTAAAGTCTTTGGTGATGCTGCATATAGACAATGGAAATTGCACGTAGCTTCCCAAAACACTGAAAAGATCTCCAATCAGCACAGTCAGAAAGGAATATTTGCTTTCCTTCATGGATTTCAACCCTTCCTATGGATTAAATCAAAATCAGAAAACGGCACACAATCAAGGAGCTCCTCACCAGATGATTCAATAGTGGCTCTATATCTTTCTCTTGAGACTGGCAAATTTTGGTTCCCAGCTCAAGTCTATAACCGTGAGAATGGTCATGCCGGGTTCATGCTTTCATGTTATGATGCCCAACTTTGCTATGACTCTAGAACTGACACTTTTCTGGCAAGGTACTCACCACATGGGAGATGGACAACTGAGGAAAACATACAATGGGACCGGCTGAGAGTGCCACCAATTGACTCTTCTCCACACGCTCTTCATATCTCTGACTGTTTGGATGACTTAAGACCTGGAGACCATATTGAGATCCAGTGGAGAAGAAACAAAGAGTTTCCTTATGGCTGGTGGTATGGTGTTATTGGTCATTTGGAAAAATGTCAAGGGCAAGGGAACCATTGCCATTGTCACAATAATGATATGGTGCTTTTGGAGTTCACACAGTACACGGCTGGTTCTAGATGGAGACAAACTGTGATAAACAGGAAGCATCATAGAGAACAAGGCAATGAAGTAGATGGTTTTTATGGTGGAATTAGGAAGCTGCAAAGTGAAGATGAAATTACAAGGTGGAAGAACTTGTGGCCAACCAAAATTGTGGAATAG 1182 0.4205 MLYFLISFVSFLILSKSFTSKPFSSGESGTKLVSSGFLGGLSSWLVSRLRKGSNPSSFFQFSLGMSLKKKSCVSKVENGEEESKVSLLDLPDLPLECILEHLSPAELCSLGTVCTSLRERSRSDHLWNKHMERKWGKVFGDAAYRQWKLHVASQNTEKISNQHSQKGIFAFLHGFQPFLWIKSKSENGTQSRSSSPDDSIVALYLSLETGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRTDTFLARYSPHGRWTTEENIQWDRLRVPPIDSSPHALHISDCLDDLRPGDHIEIQWRRNKEFPYGWWYGVIGHLEKCQGQGNHCHCHNNDMVLLEFTQYTAGSRWRQTVINRKHHREQGNEVDGFYGGIRKLQSEDEITRWKNLWPTKIVE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1299 393 Pfam F-box domain 87 128 IPR001810 GO:0005515
Apr4g1299 393 Gene3D - 72 162 - -
Apr4g1299 393 SMART fbox_2 90 130 IPR001810 GO:0005515
Apr4g1299 393 PANTHER F-BOX-LIKE PROTEIN 1 393 - -
Apr4g1299 393 SUPERFAMILY F-box domain 86 156 IPR036047 GO:0005515
Apr4g1299 393 ProSiteProfiles F-box domain profile. 84 130 IPR001810 GO:0005515
Apr4g1299 393 PANTHER ESTS AU081301(E20138) 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1299 Apr-Chr4 12112370 12115318 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1299 - - gmx:100778469 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1299 4 12112370 12115318 Apr4g1299 4 12112370 12115318 ECH