Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1297 ATGGAGAATACTAAAAAGGGTGGTAATATTTCTCTCTTGAATTTGCCTGAATCAACTTTGGATTGCATTCTCAATCACCTTTCACCAATAGATCTCATTAGGATGTCTCAAGTGTGTACTTGTTTAAGGGATAAATGTCGAAGTGATCCTTTGTGGGATAACCACATAAAACGGAAATGGGGTAGAGTCATTGGTGATGCTACTTACAAGGAATGGCAATGGCACATCACAATAGCAAGGGAGAAAGGAAACCAATTGAATCAAGAGATTAATCAGAATGGCTCACTAGGGTCTTTCAGTGGTTCTTGGCCTATGCTATGCCTTGGATCATATTTAGAAGATTGCAAGCATCTCTATGGCTCAATGTCAAATAACTTCATGATGTCTTTGTATTTCTCTCTGGAGAGTGGCAAGTTTTGGTTTCCAGCTCAACTGTACCGGGGATTACTAGTAAGCGACGCTTTGGTTAGATATGACCCCAAATCTGACTCCTTTCAAGCAAGGCAACAAAGTGGTTGTTGGCGGCTTATAGGGAACGACATCCACTGGGATGAGCTGAGATCTCCCTCATGTGTTGGTCACGTGTTTGAATGCTTAGAAGACTTAAAGCCTGAGGATCACATAGAGATCCAATGGAAAGCAAGCGATGAACTTCCTTATGAATGGTGGTATGCTGTTATTGGTCACTTGGACTTGTGCAATGAAAATGAGAATTACTGCCGTTGTCATAATTCTGAGACGCTGATCGTAGAGTTCAGACAATACCCTGAAGAGTCAAACATGAGACGAGTAAAGCTACTCAGAAATAATAACAGGGAACTAGGTAACAATCTGGTCGGACTCTATGGAAGAATTAGAAAGCTTCACGATGAGGATGAGATTCAAAGATGGAAGAATCTCTATTCAAATCATTGA 915 0.4087 MENTKKGGNISLLNLPESTLDCILNHLSPIDLIRMSQVCTCLRDKCRSDPLWDNHIKRKWGRVIGDATYKEWQWHITIAREKGNQLNQEINQNGSLGSFSGSWPMLCLGSYLEDCKHLYGSMSNNFMMSLYFSLESGKFWFPAQLYRGLLVSDALVRYDPKSDSFQARQQSGCWRLIGNDIHWDELRSPSCVGHVFECLEDLKPEDHIEIQWKASDELPYEWWYAVIGHLDLCNENENYCRCHNSETLIVEFRQYPEESNMRRVKLLRNNNRELGNNLVGLYGRIRKLHDEDEIQRWKNLYSNH* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1297 304 SMART fbox_2 15 55 IPR001810 GO:0005515
Apr4g1297 304 SUPERFAMILY F-box domain 8 63 IPR036047 GO:0005515
Apr4g1297 304 PANTHER CYCLIN-LIKE F-BOX 7 303 - -
Apr4g1297 304 PANTHER ESTS AU081301(E20138) 7 303 - -
Apr4g1297 304 Gene3D - 4 88 - -
Apr4g1297 304 Pfam F-box domain 12 52 IPR001810 GO:0005515
Apr4g1297 304 ProSiteProfiles F-box domain profile. 9 55 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1297 Apr-Chr4 12083773 12086336 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1297 - - gmx:100797585 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1297 4 12083773 12086336 Apr4g1297 4 12083773 12086336 ECH