Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1290 ATGGACACCATCACCAACTCACTCCTCAGAAACACTACTACTACTACTACAACTAGGAGTAGCGTTCACCAAACAACGCCCACCAAAAAAGCCAAACCCAAGAAAAAACCCATCAAGGTTGTCTACATATCCAACCCCATGAAGATCAAGACCAGTGCCTCCGAGTTCAGAGCCCTCGTCCAAGAACTCACCGGCCAGGACGCCGAATCGCCGCCGGACCCTTCCCGTTTCCCCGCCGCCGGCGCTCTTCAGGTCGATTCCGATGACTCTTCTTTCAAAAATGATGAAAATGACCACCTTAAGTGCGTGGTGCCTCCCCCAGTGGATCCCACTATTTGTGAAGGCCAACCCTCTTCTATTGAGAGTTTTGAGCCTTTTGACGACGACGTCTTCACTCCTCAGATGATAGAGAACATTTCCGGTCTGTTTCCCGCAAGTGTATTCTATGAATCTCCCCATCTTGGTCAGTGGTGA 474 0.5042 MDTITNSLLRNTTTTTTTRSSVHQTTPTKKAKPKKKPIKVVYISNPMKIKTSASEFRALVQELTGQDAESPPDPSRFPAAGALQVDSDDSSFKNDENDHLKCVVPPPVDPTICEGQPSSIESFEPFDDDVFTPQMIENISGLFPASVFYESPHLGQW* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1290 157 MobiDBLite consensus disorder prediction 1 27 - -
Apr4g1290 157 Pfam VQ motif 43 68 IPR008889 -
Apr4g1290 157 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 20 153 - -
Apr4g1290 157 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 20 153 IPR039335 GO:0051091
Apr4g1290 157 MobiDBLite consensus disorder prediction 63 109 - -
Apr4g1290 157 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1290 Apr-Chr4 11983500 11984269 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1290 - - ccaj:109815635 161.384