Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1288 ATGATTGGTAAAGATAGCGGTGTTTTGAAGGCATGGGAGGCAACAATGAGAAAGACGCATGCGGTTGCCAAGAAGCGTGCAAATAGCATATTTGGGACGATAACTCTAGCACATGTAGAAGAGGAAGAGAACAACCTCAACTACGATGATGATGATAACGATGAAAATGGAAATGAGATATATGACTTATACATTGAAGAGAAGGTGTTGCCAAATGGTGATTACTATACGGGGCAATGGGCAAATAACTTTCCACATGGGATGGGGAAATACCTATGGGTCGATGGGTGCATGTATGTTGGAGAATGGTTCAAAGGAAAAACTAAGGGAAAGGGTAGGTTTAGTTGGCCTTCAGGGGCTACTTATGAAGGGGATTTCAAGAGTGGTTTCATGGATGGGACCGGCACGTACACAGGGTGTAATGGGGAGACTTATAAGGGGCAATGGGTGATGAATTCGAAACAAGGTCATGGTTTGAAGAGTTATGTGAATGGAGATTGGTATGATGGGGAGTGGAAAAGGGATTTGCAAGATGGGCAAGGGAGGTATGAGTGGAAGGATGAGAGTCATTATGTTGGAGAATGGAGGAATGGGACTATTTGGGGTAAAGGGTCTTTTGTTTGGGCTAATGGGAAAATGTATGAAGGGTTTTGGGAAGATGGTTTGCCAAAAGGAAGTGGAACTTTCAAATGGCCCGATGGAAGTTTCTATGAGGGGAATTTTAGCAAAGATGGTAAGGATCAAAGTGGAACTTACCATCCATCTGAGTCATCAGAGGAGGGGAATTGTGAGTGGGATCCTCAAGAGTTGTACAACGAGTTAAGTGGGTATGTGGTTTGTCCTGGGGAGAAAGTTCAGGTTATGCCATCACAAAAGAGGCTTGCAGTTTGGAGGTCTACAAAGGGAGGGGATAGTAATAAGCCTAGGAGAATGTCAGTGGATGGGAGGGTGAGTGTTGCCGTGGAGAGGCCTAGTGATAGATTTCATTTATGGGATTGTGGGGAGGGTGATGTTAGTGGTGCTAGAACTCCTACAATGGGGACTGATCTAGATGATTGTTTGACGGGTTCACGTGTAGATGATCCAAATGAAATCCTATCTCAACTCCAACCTCTGAAAGCACCAAAGAAATCAAAGAGGCAGGGAGAGATCATATGCAAAGGGCACAAAAATTATGAGCTCATGCTTAATTTGCAACTGGGAATCAGGCATTCGGTTGCAAGGCCTGCTCCCACAGCATCACTTGATCTTAAGCCTTCAGCTTTTGATCCCAAGGAGAAAGTGTGGACAAGATTTCCACCTGAAGGATCTAAATACACCCCACCACATCCATCGTGTGACTTCAAGTGGAAGGACTATTGCCCGGTAGTTTTTAGAACACTTAGGAAGCTATTCAAGGTGGATCCAGCAGATTATATGTTATCCCTATGTGGAAATGAAGCCCTCCGTGAACTTTGCTCTCCTGGAAAAAGTGGAAGCTTCTTTTACTTGACCAATGACGATCGTTACATGATTAAGACAATGAAGAAAGCCGAAGTGAAAGTTCTCTTGAGAATGCTTCCATCCTATTACAATCATTTTAGAGACCATGAAAATACTCTAGTGACAAAGTATTATGGCCTGCATTGTGTAAAGTTAAATGGACCTATTCAGAGGAAGGTTCGATTTATCATAATGGGCAATCTCTTCTGTTCTGGGTATATCACCCATAGACGCTATGATTTGAAGGGTTCTTCGCTTGGCCGCACCTCAGATAAACCCGAGACAGAAATTAGTGAAACTACCATCCTTAAAGATCTTGATCTTAATTTTATATTTCGACTGGAAAAGTCTTGGTTTCAAGATTTTTGCAGACAAGTTGATAAGGACTGTGAGCTTCTGGAACAGGAGGGAATCATGGACTATAGTTTGCTGTTGGGAATTTATTTCAAGAATATATCACCAGATGGAGATATTATTCCTTCACAATCTCGGACTCCTACTGGAAATGAACTCACTCCCCAAACTTCAAGTGAAGACACAGATCAACTTCCTTTTGATCCCTCCAGTATCGTCCTGGGTAAAAATATGCCAGCAAAGATTGAAAGGACAGTTAGAAGAGGTGACCTCGAATTACAGCTTGTAGGAGACCCAATTGGAGAGTTCTATGATGTCGTGTTGACTTTTGGCATCATAGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCATGCTTACAAGTCCATTCAATATGACCCGACCTCAATATCAGCTGTTGATCCTAGACAATACTCAAGGCGTTTTCGTGATTTCATATTTAGAATATTTACTGAAGACTCTTGA 2328 0.4244 MIGKDSGVLKAWEATMRKTHAVAKKRANSIFGTITLAHVEEEENNLNYDDDDNDENGNEIYDLYIEEKVLPNGDYYTGQWANNFPHGMGKYLWVDGCMYVGEWFKGKTKGKGRFSWPSGATYEGDFKSGFMDGTGTYTGCNGETYKGQWVMNSKQGHGLKSYVNGDWYDGEWKRDLQDGQGRYEWKDESHYVGEWRNGTIWGKGSFVWANGKMYEGFWEDGLPKGSGTFKWPDGSFYEGNFSKDGKDQSGTYHPSESSEEGNCEWDPQELYNELSGYVVCPGEKVQVMPSQKRLAVWRSTKGGDSNKPRRMSVDGRVSVAVERPSDRFHLWDCGEGDVSGARTPTMGTDLDDCLTGSRVDDPNEILSQLQPLKAPKKSKRQGEIICKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFKVDPADYMLSLCGNEALRELCSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLLRMLPSYYNHFRDHENTLVTKYYGLHCVKLNGPIQRKVRFIIMGNLFCSGYITHRRYDLKGSSLGRTSDKPETEISETTILKDLDLNFIFRLEKSWFQDFCRQVDKDCELLEQEGIMDYSLLLGIYFKNISPDGDIIPSQSRTPTGNELTPQTSSEDTDQLPFDPSSIVLGKNMPAKIERTVRRGDLELQLVGDPIGEFYDVVLTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFRIFTEDS* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1288 775 MobiDBLite consensus disorder prediction 242 258 - -
Apr4g1288 775 Gene3D - 562 771 - -
Apr4g1288 775 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 388 771 IPR002498 GO:0016307|GO:0046488
Apr4g1288 775 SMART PIPK_2 418 772 IPR002498 GO:0016307|GO:0046488
Apr4g1288 775 PIRSF PIP5K_plant 13 775 IPR017163 GO:0005524|GO:0016308
Apr4g1288 775 SUPERFAMILY SAICAR synthase-like 387 771 - -
Apr4g1288 775 MobiDBLite consensus disorder prediction 653 677 - -
Apr4g1288 775 MobiDBLite consensus disorder prediction 240 264 - -
Apr4g1288 775 CDD PIPKc_AtPIP5K_like 391 770 - -
Apr4g1288 775 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 17 774 - -
Apr4g1288 775 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 477 769 IPR002498 GO:0016307|GO:0046488
Apr4g1288 775 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 377 561 IPR027484 -
Apr4g1288 775 Pfam MORN repeat 214 235 IPR003409 -
Apr4g1288 775 Pfam MORN repeat 76 98 IPR003409 -
Apr4g1288 775 Pfam MORN repeat 168 187 IPR003409 -
Apr4g1288 775 Pfam MORN repeat 122 143 IPR003409 -
Apr4g1288 775 Pfam MORN repeat 99 120 IPR003409 -
Apr4g1288 775 Pfam MORN repeat 145 166 IPR003409 -
Apr4g1288 775 Pfam MORN repeat 191 212 IPR003409 -
Apr4g1288 775 Gene3D - 151 201 - -
Apr4g1288 775 Gene3D - 106 150 - -
Apr4g1288 775 Gene3D - 51 105 - -
Apr4g1288 775 SMART morn 189 210 IPR003409 -
Apr4g1288 775 SMART morn 166 187 IPR003409 -
Apr4g1288 775 SMART morn 143 164 IPR003409 -
Apr4g1288 775 SMART morn 74 95 IPR003409 -
Apr4g1288 775 SMART morn 212 233 IPR003409 -
Apr4g1288 775 SMART morn 97 118 IPR003409 -
Apr4g1288 775 SMART morn 120 141 IPR003409 -
Apr4g1288 775 SMART morn 235 256 IPR003409 -
Apr4g1288 775 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 71 198 - -
Apr4g1288 775 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 17 774 IPR023610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1288 Apr-Chr4 11954776 11959922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1288 1 775 Acyl Lipid Metabolism Gene Families AT3G56960 64.758 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1288 K00889 - gmx:100781141 1394.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1288 4 11954776 11959922 Apr4g1288 4 11954776 11959922 ECH