Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1285 ATGGGTCACTCATCGGAGGATTTCTCGGTGGTGGTGTTGGCATCGGACCTCGGCGTCGATGCACGACCCTTCCTCGCTCACCAACAACAAGAAGAAGCAGAGAAATGGCACGACTGTTCCCAACACCTCTCCCCCGACGATGACTTCTCAGATCTCGATCTCTTGCAATTCCTTCTCTTCCAAGGTTCCGACAAAAACTCCCATCGCATTCTCCGCATCGTCGGCAAGTACTTTCCCGCAACGGTTGTGAGTGCGGAGCGGCTGAAGAGGTATGTTATTCACAAAATTTGCAGCGAGTTGCCAGAGGGGCCATTCTGCATTGTTTACATGCACAGCACTGTTCAGAAGGAGGATAACTCCCCTGGCCTAACCATCTTGAGGTGGATTTATGAGGAACTTCCTGGTGATTTCAAGGACAGGCTTCAAACTGTGTATTTCGTCCATCCTGGCCTTCGATCCAGGATAGTCATGGCTACCCTTGGCCGGTTTTTCTTGAGTGGAGGATTATATTGGAAGATCAAATATGTAAGCCGCCTTCAGTACCTTTGGGATGATATAAAGAAAGGAGATATTGAGATACCAGATTTTGTGAAAAGTCATGATGATATTCTGGAGCAAAGACCACTCACAGATTATGGCATTGAACCTGACCCCTTTCACTTGACTGGGATACCTTCAACTACGTTCTCGTTTGGAAAGTATGAGGAGAGGTGGGCAGCAAGGGATTTTGTATCCTAG 738 0.4797 MGHSSEDFSVVVLASDLGVDARPFLAHQQQEEAEKWHDCSQHLSPDDDFSDLDLLQFLLFQGSDKNSHRILRIVGKYFPATVVSAERLKRYVIHKICSELPEGPFCIVYMHSTVQKEDNSPGLTILRWIYEELPGDFKDRLQTVYFVHPGLRSRIVMATLGRFFLSGGLYWKIKYVSRLQYLWDDIKKGDIEIPDFVKSHDDILEQRPLTDYGIEPDPFHLTGIPSTTFSFGKYEERWAARDFVS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1285 245 SUPERFAMILY CRAL/TRIO domain 57 191 IPR036865 -
Apr4g1285 245 Pfam Divergent CRAL/TRIO domain 68 201 IPR001251 -
Apr4g1285 245 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 243 - -
Apr4g1285 245 SMART sec14_4 51 200 IPR001251 -
Apr4g1285 245 PANTHER OS01G0948300 PROTEIN 1 243 - -
Apr4g1285 245 CDD SEC14 62 198 IPR001251 -
Apr4g1285 245 Gene3D - 46 191 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1285 Apr-Chr4 11852559 11854337 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1285 - - gmx:100527837 436.032