Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1284 ATGTTACCTATGGATACTTTGCTCAAAACACCTAACAAGCTTGGTTTTTTGCACCCACTTCACGGTTATTCAGAAAAATTGGGCCATTCTGGTTCATCTAAGTTACTGAACCAGGACCTTAGATTTGGTTCTAAGAAACCACTTGTTAGATGGGGTAAATGTGGTGGTTTGAGGGCTGGTAGCAGTGCCCTTCTTGAGCTTGTTCCTGAAGTTAAGAAGGAGAATTTGGATTTTGAACTTCCTTTGTATGATTCATCAAAGGGAGCTGTGGTGGACCTTGCAGTTGTGGGAGGAGGCCCTGCAGGGCTTGCAGTTGCACAGCAGGTTTCTGAGGCTGGCCTTTCAGTTTGTGCCATTGATCCAAACCCTAGATTAATTTGGCCCAATAATTATGGTGTTTGGGTGGATGAGTTTGAAGCCATGGATTTGCTGGATTGCCTTGACACCACGTGGTCCGGCGCGGTTGTCTTCATTGATGATAAAACAAAAAAGGATCTAGATAGACCTTATGGCAGGGTCAATAGGAAACAGCTGAAGACAAAGATGCTGCAAAAATGCATATCAAATGGTGTCAAGTTTCACCAAGCCAAAGTTATCAAGGTTATTCATGAGGATTACAAATCTATGCTGATTTGTAATGATGGTGTCACTGTTCAGGCTAATGTGGTTCTTGATGCAACTGGCTTTTCAAGATGCCTTGTTCAGTATGATAAACCATACAATCCAGGTTACCAAGTTGCTTATGGGATTTTAGCTGAGGTTGATGAACATCCATTTGACATAGATAAAATGCTTTTTATGGACTGGAGAGATTCACATCTGGACAATGACAAAGAGCTAAAGCAGAGAAATAGTAGAATACCCACCTTTTTATATGCAATGCCCTTTTCATCCACCAAGATATTTCTTGAAGAAACTTCTCTTGTTGCTCGCCCTGGGTTACGTATGGATGACATACAGGAAAGAATGGTTGCTAGGTTGAAACACTTAGGTGTTAAAGTGAAAAGCATTGAGGAAGATGAGCACTGTGTCATTCCCATGGGTGGCCCCCTTCCAGTTCTACCCCAAAGAGTTGTTGGCATTGGCGGGACTGCTGGGATGGTGCATCCTTCAACTGGGTATATGGTAGCAAGGACCCTAGCTGCAGCTCCTATTGTTGCTAATTCTATTGTTCAGTGCCTTGGTTCTGATAGAGGTCTTTCAGGAGTTGATATATCTGCGGAAGTGTGGAAAGATTTATGGCCCATCCAAAGGAGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAGCTAGATTTACCAGGCACAAGGAGGTTTTTTGATGCATTTTTTGATCTGGAACCTCGTTACTGGCATGGATTCTTATCATCAAGACTGTTTCTTCCTGAGCTCATATTTTTTGGATTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGATAAAAGATACAGAATAA 1524 0.4186 MLPMDTLLKTPNKLGFLHPLHGYSEKLGHSGSSKLLNQDLRFGSKKPLVRWGKCGGLRAGSSALLELVPEVKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDKTKKDLDRPYGRVNRKQLKTKMLQKCISNGVKFHQAKVIKVIHEDYKSMLICNDGVTVQANVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDIDKMLFMDWRDSHLDNDKELKQRNSRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMVARLKHLGVKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQCLGSDRGLSGVDISAEVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELIFFGFSLFSYASNTSRIEIMAKGTLPLVNMINNLIKDTE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1284 507 SUPERFAMILY FAD/NAD(P)-binding domain 91 475 IPR036188 -
Apr4g1284 507 TIGRFAM carotene-cycl: lycopene cyclase family protein 92 487 IPR010108 GO:0016117|GO:0016705
Apr4g1284 507 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 507 - -
Apr4g1284 507 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 507 - -
Apr4g1284 507 Gene3D - 89 436 IPR036188 -
Apr4g1284 507 Pfam Lycopene cyclase protein 92 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1284 Apr-Chr4 11832110 11834249 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1284 K06443 - gmx:100810895 939.488