Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1281 ATGGAAGCCAAGATGGGTAGCTTCTTCGAATCCATCGGAAACTTCTTCTCCGGTGGCGATCAGATCCCTTGGTGCGACCGTGACGTCATCGCTGGCTGTGAGAGAGAAGTTGCAGAGGCTTCTAATGGTGACAATGAGGAGCGGAAGAATGAGAGCATAATGAGGTTGTCATGGGCCCTTGTTCATTCAAGGCAAAAGGAAGATGTTCAGCGCGGGATAGCCATGCTTGAAACTTCTTTGGGAAATGATAAAAGTCCTTTGCATCAAAGGGAGAAGCTTTATCTTCTGGCTGTTGGTTATTATAGAAGTAATGACTACGCTAGGAGCCGGCAGCTTTTGGAGCAATGTTTGAATATTGCACCCGATTGGAGGCAGGCACTATCCCTTAAGAAAATAGTTGAAGATCGAATTGCTAAAGATGGTGTAATAGGAATTGGCATCACTGCAACAGCTGTGGGACTTATAGTTGGTGGCATTGCTGCCGCTTTGGCCCGGAAGAGTTGA 504 0.4683 MEAKMGSFFESIGNFFSGGDQIPWCDRDVIAGCEREVAEASNGDNEERKNESIMRLSWALVHSRQKEDVQRGIAMLETSLGNDKSPLHQREKLYLLAVGYYRSNDYARSRQLLEQCLNIAPDWRQALSLKKIVEDRIAKDGVIGIGITATAVGLIVGGIAAALARKS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1281 167 Pfam Fis1 C-terminal tetratricopeptide repeat 90 142 IPR028061 -
Apr4g1281 167 Pfam Fis1 N-terminal tetratricopeptide repeat 51 80 IPR028058 -
Apr4g1281 167 SUPERFAMILY TPR-like 10 166 IPR011990 GO:0005515
Apr4g1281 167 Gene3D Tetratricopeptide repeat domain 24 166 IPR011990 GO:0005515
Apr4g1281 167 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN B 1 166 - -
Apr4g1281 167 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 1 166 IPR016543 GO:0000266
Apr4g1281 167 PIRSF TPR_repeat_11_Fis1 4 166 IPR016543 GO:0000266
Apr4g1281 167 CDD Fis1 23 141 IPR033745 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1281 Apr-Chr4 11806158 11809023 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1281 K17969 - gmx:100785425 301.597