Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1279 ATGGGTTGCTCAGCCTCAAGAACCATCACCATTGTGGCCAACAAAAATCCAGAGGAACCCTCTCCTTCTGCTTCCTCTTCTTCTTCTTTCTCTTCTTCTTCTGCTTCACACTGCTCCAATTCTTCACCACAAGTCCGCAGAGCCCTTTCCCTCCCAATGCCTCTTGTTCATCACCCTCCCATAAAAAAGGGTGACACACACCACCTTGTCTCCCTCACCTCAACCACCTACGGTTCCCTTCTCCTCATTGACCAAAAAGACCCCAACTTTAGCCACAAGGACCAACCCCATCTCAGCAAAACCTCAAACCAAACAGACCCAGAACAATCACTCTCCCCTGACTCTGTTATCAACACATGGGAACTCATGGATGGCTTAGATGAAGAAGAAGAAGAAGAAGATTCACGCCATGACACTGCCAAGCCTCTTCACACTTCCATTATAGACAAACCAACTTCATGCAGGTACACAGCCTTTGATGGGTCTGCAAGGAAGAAACTGCTTGATTCCTTTGAATCACTGAAAGCCTCACAAGCAACCATGGAAAATTCGTCCTCTTTCTCTTGTTCTTCTTCGCCTCTATTGACAAAGAAGCCACTATGGCAGCATTTGTCTGAAGAAGCTTTGCTTGCTAAGTTAGACCCAAGTGTGGCTTGGAGTTACAGAAGAGCATTATCATCAAGGCATCTAGGTAGAAACACCCTATTCAGAGATGTAAGATCAATGGGTTCTAGCCCTTTAAGATCTTCTTCTCTCTCATTTGCTAACAACAATTTGTGCCATTTACCCGGCTCAGAAGACAGAATAGTACTGTATTGTACTAGTTTGAGAGGGATCCGCAAGACCTATGAGGATTGTTGTTCAGTTAAGATGATACTGAGGGGCTTCAGAGTTGCGGTTGATGAGAGAGACATCTCAATGGACTCATCTTATAGGAAGGAGTTGCAGGATGCACTTGGTGGCAAAGTAGTGACCTTGCCACAAGTGTTTATCAAAGGGAAACATGTGGGAAATGCAGAGGAAATGAAGCAGCTGAATGAATCCGGAGAATTGGCAAAGCTTTTGGAAGGTTTTCCTACACAAGATCCTGGGTTTGTGTGTGAAAATTGTGGAGATGCAAGGTTTGTGCCATGTCCTAATTGCAATGGTAGCAGAAAGGTGTTTGAGGAGGAAGGAGGAGGGTTGAGAAGGTGCCCTGATTGTAATGAAAATGGCTTGATAAGATGCCCAGGTTGCTGCTCATGA 1245 0.4522 MGCSASRTITIVANKNPEEPSPSASSSSSFSSSSASHCSNSSPQVRRALSLPMPLVHHPPIKKGDTHHLVSLTSTTYGSLLLIDQKDPNFSHKDQPHLSKTSNQTDPEQSLSPDSVINTWELMDGLDEEEEEEDSRHDTAKPLHTSIIDKPTSCRYTAFDGSARKKLLDSFESLKASQATMENSSSFSCSSSPLLTKKPLWQHLSEEALLAKLDPSVAWSYRRALSSRHLGRNTLFRDVRSMGSSPLRSSSLSFANNNLCHLPGSEDRIVLYCTSLRGIRKTYEDCCSVKMILRGFRVAVDERDISMDSSYRKELQDALGGKVVTLPQVFIKGKHVGNAEEMKQLNESGELAKLLEGFPTQDPGFVCENCGDARFVPCPNCNGSRKVFEEEGGGLRRCPDCNENGLIRCPGCCS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1279 414 ProSiteProfiles Glutaredoxin domain profile. 257 362 - -
Apr4g1279 414 MobiDBLite consensus disorder prediction 1 46 - -
Apr4g1279 414 MobiDBLite consensus disorder prediction 87 117 - -
Apr4g1279 414 Gene3D Glutaredoxin 267 359 - -
Apr4g1279 414 SUPERFAMILY Thioredoxin-like 264 356 IPR036249 -
Apr4g1279 414 MobiDBLite consensus disorder prediction 95 117 - -
Apr4g1279 414 CDD GRX_GRX_like 268 409 - -
Apr4g1279 414 Pfam Glutaredoxin 270 336 IPR002109 -
Apr4g1279 414 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 31 413 - -
Apr4g1279 414 PANTHER GLUTAREDOXIN FAMILY PROTEIN 31 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1279 Apr-Chr4 11796345 11798055 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1279 K17479 - gmx:100811817 624.394