Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1273 ATGAACTCAAGCGTCATCGTTGCTGCAACAGTGCTTGCACTATGCGCTATCACCTTCGCCTTGTTCAACCCACGAGCCCTGTTTTCACCGCCTCCTATTCATGGATCCAAGGACCAACTGCACGCTTCTCAGATACTCCACGTCACCGGAGCCGTTGGACCGGAGAGTCTCGTTTTCGACGGTGACGGCGGTGGGCCTTACACCGGCGTCGCCGATGGCCGGATTCTCAAGTGGGAAGGGGAAGAACGAGGTTGGACTGAATTTGCTGTTACCAGTTTCAATAGGTTGGCCTGTGTACATCCATTTGCGCTGGAGTTGGAACATGTTTGTGGGAGGCCACTAGGACTGAGGTTTGATAAGAAAAGTGGAGATCTGTACATTGCTGATGCCTACCTTGGCCTAAAAGTAGTAGGACCTACAGGGGGTTTGGCCATGGATGTGGTAACAGAAGTTGAAGGTCAGCCCTTGCAATTTACCAATGACATGGACATCAGTGAAGATGAAGATGTCATATACTTCAGTGATTCAAGCACAATGTTCCAGAGAAGGGAATTTATGCTTGTACTCCTTAGTGGAGACAAAACTGGCCGGTTAATGAAATATGACAAACTAACAAAAAAAGTAACAGTTTTATTACGCAACCTTGCTTTTGCCAATGGTGTTGCTTTAAGCAAAGATGGCTCATTTGTTCTGGTAGCAGAAACTACTTCTTTCAGGATCTTGCGGCTTTGGCTTCGAGGACCTAACGCTGGCGAAGTGGATACTTTTGCAGTTGTACCTGGTTTTCCAGACAATATTAGACGAAATTCAGAAGGGCAGTTCTGGGTAGCCCTTCATGCAAAAGGAAGTCCTTTTGCAAAGTGGCTTTCTTCAAATCCATGGGCAGGAAAGACACTGCTAAAGCTTGGATTTAACATCAAGCAGTTGCACTCGTCATTTGCCGGGTGGAAGCCTCATGCCACTGCTGTAAAGCTAAGTGATAAAGGAGAGATTTTAGAAGTCTTGGAAGATTATGAAGGAAAAACCTTGAAGTTCATCAGTGAAGTGGAAGAGAGAGATGGGAAACTTTGGATTGCATCAGTGTTGATGCCTTTCATTGGCATTTATAGTTTATGA 1116 0.4579 MNSSVIVAATVLALCAITFALFNPRALFSPPPIHGSKDQLHASQILHVTGAVGPESLVFDGDGGGPYTGVADGRILKWEGEERGWTEFAVTSFNRLACVHPFALELEHVCGRPLGLRFDKKSGDLYIADAYLGLKVVGPTGGLAMDVVTEVEGQPLQFTNDMDISEDEDVIYFSDSSTMFQRREFMLVLLSGDKTGRLMKYDKLTKKVTVLLRNLAFANGVALSKDGSFVLVAETTSFRILRLWLRGPNAGEVDTFAVVPGFPDNIRRNSEGQFWVALHAKGSPFAKWLSSNPWAGKTLLKLGFNIKQLHSSFAGWKPHATAVKLSDKGEILEVLEDYEGKTLKFISEVEERDGKLWIASVLMPFIGIYSL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1273 371 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 10 3 369 - -
Apr4g1273 371 Gene3D - 36 371 IPR011042 -
Apr4g1273 371 SUPERFAMILY Calcium-dependent phosphotriesterase 20 366 - -
Apr4g1273 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
Apr4g1273 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Apr4g1273 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 3 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1273 Apr-Chr4 11640159 11643507 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1273 - - gmx:100815025 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1273 4 11640159 11643507 Apr4g1273 4 11640159 11643507 ECH