Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1272 ATGAGGCGGCAACAACGCTTCACGGCAGCCATCGCCACCGCGATTGTTGCTACAGCTTGGATAGCATATAACTGCAGTGTTGGGCCATGGAGGAAGGTTAGGAAAGGTTGGAAGTGCGAGATTGTTCCGATTGATGGCGCCGTTGGAGCAGAGAGTTTTGCGTTTGATCCTAACGGCAAAGGGCCTTACACAGGCGTATCTGACGGTCGAATTATCAAATGGAACGACACTCTGAATCATTGGCACAACTTTTCCGTTACTTCTTCGGATAGAGATGATGAATGCGGAGGAGCATACTCTGAGCATCCCAAGAAAGAGCATATCTGTGGGCGTCCACTGGGTTTGTGTTTCAGCATGTCATCAGGTGACCTTTACATTGCTGATGCTTACAAGGGCATACTTGTTGTTGGTCCCAATGGTGGCACTCCTAAAACACTCATCTCTCACGTACATGCCCAACCCTTGGCCTTCACTAACAGTTTGGACATTGATCAAAGAAATGGAGCACTCTACTTCACCACCAGCAGTTCTAAATATCAAAGGAGGAACTACATCTCTCTGATCCTAAGCAGAGATACAACAGGGAAGCTAATAAAATATGAACCCAAAAGCGAACAAGTTAGTGTTCTTCTAAGCAATCTCTCATTTGCAAATGGAGTTGCACTGAGCAAAGATGGTGACTATATTCTAATAGTAGAGACCGCAAACTGCAGAGTGCTAAGGTATTGGCTAGAAACACCAAAAGCTGGAACCTTAGAAGTCTTTGCCGATCTACCAGGTTTCCCAGACAACATAAAACGAAGTCCAAGAGGGGGATTTTGGGTCGGAATTTATTCAAGAAGAGAGAAACTTATCCAATGGATTTTATCATATCCTTGGATTGGAAAAACTTTGCTTAAGCTTCCTCTGGACATCACAAAAGCTTATTCATATTTGGCTAAGCTTAAAGGGAGAAGAGGACTGGCAATTAGGTTAAGTGAGCAAGGGGATGTTTTGGAAATTATGGAAGACAAGAATGGAAAAAGGGGGAGGTCTATTAGTGAAGTTGAGGAAAAAGATGGGGTATTATGGGTGGGATCCATAGATGCACCTTTTGCTGCTAAGTATAATATTCTTGTTGCAAAAGGATAA 1131 0.4359 MRRQQRFTAAIATAIVATAWIAYNCSVGPWRKVRKGWKCEIVPIDGAVGAESFAFDPNGKGPYTGVSDGRIIKWNDTLNHWHNFSVTSSDRDDECGGAYSEHPKKEHICGRPLGLCFSMSSGDLYIADAYKGILVVGPNGGTPKTLISHVHAQPLAFTNSLDIDQRNGALYFTTSSSKYQRRNYISLILSRDTTGKLIKYEPKSEQVSVLLSNLSFANGVALSKDGDYILIVETANCRVLRYWLETPKAGTLEVFADLPGFPDNIKRSPRGGFWVGIYSRREKLIQWILSYPWIGKTLLKLPLDITKAYSYLAKLKGRRGLAIRLSEQGDVLEIMEDKNGKRGRSISEVEEKDGVLWVGSIDAPFAAKYNILVAKG* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1272 376 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 12 366 - -
Apr4g1272 376 Pfam Strictosidine synthase-like, N-terminal 39 74 - -
Apr4g1272 376 PANTHER STRICTOSIDINE SYNTHASE-RELATED 12 366 - -
Apr4g1272 376 SUPERFAMILY Calcium-dependent phosphotriesterase 31 364 - -
Apr4g1272 376 Pfam Strictosidine synthase 159 246 IPR018119 GO:0009058|GO:0016844
Apr4g1272 376 Gene3D - 38 374 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1272 Apr-Chr4 11625878 11635133 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1272 - - gmx:100789150 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1272 4 11625878 11635133 Apr4g1272 4 11625878 11635133 ECH