Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1271 ATGGCTCAAATGGCTGCGAGGATCCTCGGTTGCAAGTGTAAACCGCTGGTTGCGCTCCGCAAATGGCGCTGCTCGTCGTACTCCTCCGCTTCCGCTGCGGCGGTGGCGGCGGAGAACACGGAGGTGAAGGATTATGCCGATTACCGGAGGTCACTGTACGGACAGATCACTCACAAGGCCCTTCTGGTTGACGCTGTTGGAACTCTTTTCATCCCTTCTCAACCCATGGCAGAGATATACAGGAAGATTGGGGAGAAGTACGGTGTGGAGTATTCGGAGGATGAGATACTGTATAGATACAGAAGAGCGTACGGTCAGCCTTGGGGTAAATCTCGTCTCAGATATGTTAATGATGGTAGGCCGTTCTGGCAATATATAGTTAGTTATTCCACCGGCTGTTCAGATCCTCAATACTTTGAAGAACTTTATAACTACTATATGACAGACAAGGCATGGCACCTCTGTGATCCAGGTGCAGAAGAAGCATTCAAAACTCTTAGAGAATCAGGTGTGAAATTGGCTGTTGTGTCAAATTTTGACACTCGATTAAGACCTCTCCTGCGGGCATTAAATTGCGATAGTTGGTTTGATGCTGTAGCAGTGTCAGCTGAGGTTGCGGCAGAGAAGCCAAATCCAACTATATTTCTTAAAGCATGTGAACTATTGGGTGTAAAACCTGAAGATGCTGTTCATGTTGGGGATGATCGCAGAAATGATATATGGGGTGCCAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGCAGTGATGTTTATTCCTTTAAGGAGATAGCACAGAGGATTGGGGTCCAGAATGCTTAG 819 0.4762 MAQMAARILGCKCKPLVALRKWRCSSYSSASAAAVAAENTEVKDYADYRRSLYGQITHKALLVDAVGTLFIPSQPMAEIYRKIGEKYGVEYSEDEILYRYRRAYGQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDPQYFEELYNYYMTDKAWHLCDPGAEEAFKTLRESGVKLAVVSNFDTRLRPLLRALNCDSWFDAVAVSAEVAAEKPNPTIFLKACELLGVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVYSFKEIAQRIGVQNA* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1271 272 PANTHER - 28 270 - -
Apr4g1271 272 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 148 249 IPR006439 -
Apr4g1271 272 Pfam Haloacid dehalogenase-like hydrolase 122 250 IPR041492 -
Apr4g1271 272 CDD HAD_dREG-2_like 159 270 - -
Apr4g1271 272 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 28 270 - -
Apr4g1271 272 SUPERFAMILY HAD-like 59 260 IPR036412 -
Apr4g1271 272 SFLD Haloacid Dehalogenase 59 252 - -
Apr4g1271 272 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 58 69 IPR006439 -
Apr4g1271 272 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 166 179 IPR006439 -
Apr4g1271 272 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 196 212 IPR006439 -
Apr4g1271 272 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 214 234 IPR006439 -
Apr4g1271 272 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 59 252 IPR011949 -
Apr4g1271 272 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 159 247 IPR006439 -
Apr4g1271 272 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 59 252 - -
Apr4g1271 272 Gene3D - 74 147 IPR044924 -
Apr4g1271 272 Gene3D - 63 254 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1271 Apr-Chr4 11611559 11616778 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1271 - - gmx:100789672 475.322