Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1264 ATGGGATCAGAAAATAAAGTGGAGCTTCCAGTTATCAACTTCTCCATTCAAGACTTGGAATTGAATGAAGCAAAGTGGGAATCAGTGAAATACCAAGTCCACAAAGCACTTGTAGAATATGGTTGCTTTGAGGCCATGTTTGATAAAGTCCCTTTGGACCTCCTCAAAGCCATTTTTGTAGAACAGGAAGAGCTTTTCAATCTTCCTTTACAAACCAAGCAACGTTTGGTGCATGGTAATAGGCCCTACCATGGTTATCTTGGGCCTCATCAACTCTATGAGAGTTTGGGAATTGAGGATGCAGATGTTTATGAGAACGTGGAAAGTTCACTCAAAATCTTATGGCCAGAAGGAAAACCAAATTTCAGCAACAATATACAATCCTTCACAGAGCAAGTGACAAGGTTGGATCAGATTATTAGGAAGATGTTTCTGGAGAGTTTAGGTGTTGAAAAATATTTGGACCAACACATGGACTCAACACATTACCTGACACGGCTTATCAAGTACAAAGGCCCTCAAACTAATGAAGCAAAAGTTGGCATATTAGAGCACACAGATAAGAACACATTTACCATATTGTGTCAAAATCAAATTGACGGTTTAGAGTTACAGACTAAAAGTGGAGAGTGGATCAAATACAAGCCCTCATCATCAAATAGCTTCGTGGTTGTTGCTGGGGACGCCCTTCATGCATGGACAAATGGCAAAGTGCATGCACCCATTCACCGAGTGATGATGATTGGAAATGAAACAAGGTTCTCTCTTGGAGTGTTCACAGTTCCAAAACAAGGGGTCATAATAGAAGCCCCAGAAGAGCTTGTGACAGAGGAGCATCCTTTGCTTTTTAAGCCCTATGTCCACAGTGAGTTCATGGAGTTTCTTCGTTCTTCTGAGGGTGTTAAAAATGCTCTGAAGGTTTATTGTGGAGTCTGA 936 0.4103 MGSENKVELPVINFSIQDLELNEAKWESVKYQVHKALVEYGCFEAMFDKVPLDLLKAIFVEQEELFNLPLQTKQRLVHGNRPYHGYLGPHQLYESLGIEDADVYENVESSLKILWPEGKPNFSNNIQSFTEQVTRLDQIIRKMFLESLGVEKYLDQHMDSTHYLTRLIKYKGPQTNEAKVGILEHTDKNTFTILCQNQIDGLELQTKSGEWIKYKPSSSNSFVVVAGDALHAWTNGKVHAPIHRVMMIGNETRFSLGVFTVPKQGVIIEAPEELVTEEHPLLFKPYVHSEFMEFLRSSEGVKNALKVYCGV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1264 311 Gene3D - 1 298 IPR027443 -
Apr4g1264 311 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 262 IPR005123 -
Apr4g1264 311 Pfam 2OG-Fe(II) oxygenase superfamily 167 260 IPR044861 -
Apr4g1264 311 SUPERFAMILY Clavaminate synthase-like 7 296 - -
Apr4g1264 311 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 90 IPR026992 -
Apr4g1264 311 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 310 - -
Apr4g1264 311 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 4 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1264 Apr-Chr4 11489511 11490882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1264 3 293 Glycosyltransferase AT5G59530 24.516 3.63e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1264 - - gmx:100817152 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0875 8 9286934 9288937 Apr4g1264 4 11489511 11490882 PCT