Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1258 ATGGCTATCTTGTTGTCTACGATTTTTGTTCCTTCTACTAAGCTCAGCTCCAAGCTTTCCATCTTCAGCAACAACAGGCAAGAACACGCAGTTCCAAATTTGCGCCATTTCGAAGATAATAGCAACCGCTTTCAGAAAGTTTCGTCATTTATTTCCTTTGCGGTGAACGGTGACTCAACTCTTGCTAGAACCACGCCAAAGAGAGATGGTAAAAACCCGTTTCTGAGTGAGGGAAGGGATGAAGATGAAGCTCGTGGACCTATTTGCCCTGGTTGTGGAGTCTTCATGCAAGATAATGACCCTAACCTTCCTGGGTATTATCAACAAAGGAAGGTTAAAGTTGAAGAGTTTACAGAAGAGGATGATGGGTTTCATGATGTGGAAGAAGAAGATGATGATGATAATGAAGTGGGGTTTGTGGATGGAAGTGAAAGTAAGCTTGGAGAAGAAATTGAGGGGTTAAGAGATGAATTTGATTGGGATTCTGATGAGTGGGAAGCTAAGTTACTAGGGGAAGATGATGATGATGAAAAGGATTTGGATGGGTTTGCACCTGCAGGGGTTGGTTATGGTAACATTACTGAGGAGTATTTGGAGAGGATAAAGAAGAAGAAGGTGTCCAAAGCTGAGAAGAAGAAGATGGCTAAGGAGGCTGAGAAGGTGAAAGAAGAGGTTACTGTGTGTGCTCGGTGTCATTCCTTGAGAAATTATGGCCAGGTTAAGAACCAGACAGTTGAGAATTTGATACCAGATTTTGATTTCGATAGGTTGATTTCTACTCGGTTGATGAATCCTTCTGGTAGTGGAAGTGCTACTGTTGTTGTCATGGTTGTGGATTGTGTTGATTTTGATGGTTCTTTCCCTAGAACCGCGGTGAAATCATTGTTTAAGGCATTGGATAAAATGCAGGATAACATGAAACAGGCCAAGAAGTTGCCAAAGCTTGTTCTAGTGGCGACAAAAGTTGATCTCCTTCCTTCCCAGGTTTCTCCTACAAGGTTAGATAGATGGGTTAGAAACCGTGCAAGGTATGGAGGTGCACCAAAGTTAAATGGGGTTTATATGGTCAGTGCTCGAAAGGACTTAGGAGTAAGGAATTTGTTATCCTTTATAAAGAATTTGAGCGGCCCTCGAGGGAATGTGTGGGTAATTGGAGCTCAAAATGCAGGTAAGTCTACTCTGATCAATGCGTTTGCAAAGAAAGAAGGAGCCAAAGTTACTAAGCTCACAGAAGCTGCAATTCCTGGGACAACACTTGGGATCTTGAGAATTGCAGGAATTTTGCCGGCTAAGACGAAGATGTTTGACACTCCAGGGCTCTTGCATCCATATTTAATATCAATGAGATTGAACCGGGATGAGCAAAAAATGGTGGAGATACGGAAGGAACTTCGGCCACGGACATATAGAATTAAGGTAGGGCAGGCTGTCCACATCGGTGGCTTAACGAGACTTGACCTTGTTGAATCCTCTGTTGAAACAATATATGTCACAGTTTGGGCATCACCAAATGTTTCCCTTCACATGGGGAAAATCGAAAATGCCGATGAGGTTTGGAGTAATCATGTTGGTGTTAGGCTGCAGCCTCCCATGGGTAATGACCGAGCTGCTGAATTAGGAACCTGGGAAGAAAGGGAAGTAAAAGTGTCTGGATCTAGTTGGGACGTCAACAGCATTGACATAGCAATTGCGGGTTTAGGTTGGTTCTCTTTGGGTCTCAAAGGTGAAGCAACCTTGAAATTGTGGGCCTTTGATGGAGTTGAAATAACTGAGAGAGAACCTTTGGTTCTTGACCGGGCCCCATTCCTTGAGAAACCAGGATTTTGGTTACCAAAAGCCATCTCTGATGCTATTGGCAACCAAACTAAACTTGAAGCTCAAAGAAGGAAACAACTTGAAGATGAGGATACGGAATACGTGGGGACAGGGCCAGGGCTTTCCGCATGA 1947 0.4361 MAILLSTIFVPSTKLSSKLSIFSNNRQEHAVPNLRHFEDNSNRFQKVSSFISFAVNGDSTLARTTPKRDGKNPFLSEGRDEDEARGPICPGCGVFMQDNDPNLPGYYQQRKVKVEEFTEEDDGFHDVEEEDDDDNEVGFVDGSESKLGEEIEGLRDEFDWDSDEWEAKLLGEDDDDEKDLDGFAPAGVGYGNITEEYLERIKKKKVSKAEKKKMAKEAEKVKEEVTVCARCHSLRNYGQVKNQTVENLIPDFDFDRLISTRLMNPSGSGSATVVVMVVDCVDFDGSFPRTAVKSLFKALDKMQDNMKQAKKLPKLVLVATKVDLLPSQVSPTRLDRWVRNRARYGGAPKLNGVYMVSARKDLGVRNLLSFIKNLSGPRGNVWVIGAQNAGKSTLINAFAKKEGAKVTKLTEAAIPGTTLGILRIAGILPAKTKMFDTPGLLHPYLISMRLNRDEQKMVEIRKELRPRTYRIKVGQAVHIGGLTRLDLVESSVETIYVTVWASPNVSLHMGKIENADEVWSNHVGVRLQPPMGNDRAAELGTWEEREVKVSGSSWDVNSIDIAIAGLGWFSLGLKGEATLKLWAFDGVEITEREPLVLDRAPFLEKPGFWLPKAISDAIGNQTKLEAQRRKQLEDEDTEYVGTGPGLSA* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1258 648 Pfam 50S ribosome-binding GTPase 381 455 IPR006073 GO:0005525
Apr4g1258 648 MobiDBLite consensus disorder prediction 627 648 - -
Apr4g1258 648 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 1 639 - -
Apr4g1258 648 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 1 639 - -
Apr4g1258 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 490 IPR027417 -
Apr4g1258 648 Gene3D - 267 443 IPR027417 -
Apr4g1258 648 MobiDBLite consensus disorder prediction 62 83 - -
Apr4g1258 648 Coils Coil 204 224 - -
Apr4g1258 648 CDD YqeH 228 440 - -
Apr4g1258 648 Coils Coil 292 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1258 Apr-Chr4 11445555 11453498 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1258 - - gmx:100805561 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1258 4 11445555 11453498 Apr4g1258 4 11445555 11453498 ECH