Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1250 ATGGTGTCAAAACATAGTTTTTATGAACATGAGAGTCTTATATCAATCAAAATTTTCATACTTATACTCCTTAATTCTATGCTTCATAAAGCAGACTCAGGCTGCAATAACTCTGTTGCCACTTCATTAGTCCCATTTCAACCTCATGAGATCCTCTCATCACTGCAAGCACTAGCTCTTGATGGCCACTTTAGCATGAGGGACAATGAGAATGCTGCCAAGGACTTTGGCAACATAAACCATTTCCCCCCTCTAGCAGTGCTTCATCCAAAAACAGTTTCTGATATTTCACGCACCATAAAGCATATTTTTGACATGGGTTTTGCTTCAGAGTTTAAGGTTGCTGCTAGAGGCCATGGCCACTCCCTACGAGGCCAAGCACAAGCCCATGGAGGCCTGGTTATTAACATGGAGTCTCTGCAGGGTCCTGACATAAAAGTTCACAATGGAGAATTTCCTTATGTAGATGTTTCAGGAGGTGAGTTGTGGATAAACATTCTGCATGAAACTCTTAAACATGGGTTGGCACCAAAATCTTGGACAGATTATCTTCACCTTACTGTTGGTGGCACTCTTTCAAATGCTGGAATAAGTGGACAAGCCTTTAGGCATGGACCTCAGATCAATAACATCTTCCAGCTAGAAGTTATCACAGGAAAAGGAGAGGTGGTCACCTGCTCAGGAAACCGAAATGCTGACCTTTTTTATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATCACAAGGGCTAGAATTTCTCTTGAGCCAGCACCAAAGATGGTGAAATGGATTAGGGTGCTCTACTCAGACTTCTCTACATTTGCAAGGGACCAAGAGTATTTGATATCACTTAAAAACACATTTGATTATATTGAAGGATTTGTGATCATAAACAGAACTGGCATCCTTAACAATTGGAGATCATCCTTTGATCCCAAAGACCCACTTCAAGCCAGCCAATTCAATTCTGATGGGAAAACATTCTACTGTCTTGAGATGGCAAAATACTTCAACCCTGATGAAGCTGAAGTCATGAATCAGGGTGTTGATCACCTACTCTCAGAACTGAGGTATATCCCACCCACACTCTTCATGTCAGAAATTTCTTACGTGGAGTTCCTAGACAGAGTGCATGTTTCTGAGAAAAAGCTAAGAGGAAAAGGCTTATGGGAAGTTCCACATCCTTGGCTGAACCTTCTGATCCCAAGTAGTGAGATTCATCGCTTTGCTGAAGAAGTATTTGGCAATATTCTTAAAGACACAAGTAATGGTCCCATACTAATTTACCCAGTCAACCAAACAAGGTGGAACAGTAAAACATCTTTGGTTACACCAGAGGAAGATGTTTTCTACCTTGTGGCATTCCTATCTTCGGCAGTCCCATTTTCAAGTGGTGCAAACAGTTTAGAATACATTATAAGCCAAAACAAAAGGATCATAGAGTTTTGCTCCAATGCCCAACTGAGAGTGAAGCAATATCTTCCACATTACAGCACACAGGAAGAATGGAAAGTCCACTTTGGGTCACAATGGAAAGCATTTGTGGAAAGAAAAAGGGCCTATGACCCACTAGCACTGCTTGCACCTGGCCATAGAATCTTTCAAAAGGCAATGTATAGTTCCTGTTAG 1632 0.4161 MVSKHSFYEHESLISIKIFILILLNSMLHKADSGCNNSVATSLVPFQPHEILSSLQALALDGHFSMRDNENAAKDFGNINHFPPLAVLHPKTVSDISRTIKHIFDMGFASEFKVAARGHGHSLRGQAQAHGGLVINMESLQGPDIKVHNGEFPYVDVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQINNIFQLEVITGKGEVVTCSGNRNADLFYGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSDFSTFARDQEYLISLKNTFDYIEGFVIINRTGILNNWRSSFDPKDPLQASQFNSDGKTFYCLEMAKYFNPDEAEVMNQGVDHLLSELRYIPPTLFMSEISYVEFLDRVHVSEKKLRGKGLWEVPHPWLNLLIPSSEIHRFAEEVFGNILKDTSNGPILIYPVNQTRWNSKTSLVTPEEDVFYLVAFLSSAVPFSSGANSLEYIISQNKRIIEFCSNAQLRVKQYLPHYSTQEEWKVHFGSQWKAFVERKRAYDPLALLAPGHRIFQKAMYSSC* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1250 543 Pfam FAD binding domain 84 227 IPR006094 GO:0050660
Apr4g1250 543 Gene3D - 137 260 IPR016169 -
Apr4g1250 543 Gene3D - 261 494 IPR016170 -
Apr4g1250 543 SUPERFAMILY FAD-binding/transporter-associated domain-like 66 257 IPR036318 GO:0050660
Apr4g1250 543 ProSiteProfiles PCMH-type FAD-binding domain profile. 80 258 IPR016166 GO:0071949
Apr4g1250 543 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 259 535 IPR015345 GO:0009690|GO:0019139|GO:0050660
Apr4g1250 543 Gene3D - 68 535 IPR016167 -
Apr4g1250 543 PANTHER GULONOLACTONE OXIDASE 13 540 - -
Apr4g1250 543 SUPERFAMILY FAD-linked oxidases, C-terminal domain 259 535 IPR016164 GO:0003824|GO:0050660
Apr4g1250 543 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 13 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1250 Apr-Chr4 11321677 11323981 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1250 K00279 - gmx:100777568 954.51