Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1244 ATGGTGGGAAGCATTATGGGAATGGATCATAATCCATACTCAAATGGGTCTGTTTCTGTTCAAAATTGTAATGGGGTAGAGGAGAAGCTTGATGGTTTGAGGAGGCTTGTTGGTAAGGGTGATGGTGATCCTTTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCATTGCTACAAGATACTTATGGTCAATTCAGGGATAAGATACAAATCAGGATATGGAGAAGAGCAGGAAGAGCAGTTGATAGAGGCACTGCAGAACATCTCTTTGAAGTTATCAACTCAAGAGAGGATGTGTTGAGGAGGTTGATTCGGCGTTGTGCTTATCTTAAATATGTTGAGGCAAGGCTTGGTGATAGGACCCTCTTTGCTGATGAGATTCTGAAAGATGGGTTTTGCTTGAATATGATTGATACCCCTCTTTGTCCTTTGAAGGTTGTGACAAACTTGCAAGAAGCTGTTTGGGATGCTGATATTGTAGTTAATGGTTTGCCTTCAACTGAAACACGTGAGATTTTTGAAGAGATAAGTAAATATTGGAAGGAAAGGATCACTGTGCCTATAATTATCTCTTTGTCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCTCATATTATAACTCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTCTATCTTGGGGGTCCAAACATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCTAGAATATGTGGAGCTGAGAAATGGAGGAAACATCTGGCAAAGTTTTTAAGACAACCACACTTTATTGTCTGGGACAACAGTGACCTTGTCACACATGAGGTCATGGGTGGCTTGAAGAATGTCTATGCAATTGGTGCATATTTTTTATTTTTCTTTTTAATGCTGTCAGGAATGGTAGCTGCCCTTACCAATGAGAGTGCTACCAGCAAATCTGTATACTTTGCACACTGTACATCAGAAATGATATTTATCACTCACTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGGCCATTACTGGCTGACACTTATGTGACCTTGTTAAAAGGCCGTAATGCATGGTATGGCCAGATGTTAGCTAAGGGTCAATTAAGACCAGACATGGGTGATAGCATTAGTGGCAAGGGAATGATTCAGGGTGTGTCTGCAGTGGAGGCATTCTTTGAACTTCTGAGCCAATCTAGCCTGAATGTGTTACATCCTGAAGAAAACAAGCCTGTTGCTCCTGTAGAGCTATGCCCTATCTTGAAGACACTATACAAAATATTGATATCCAGGGAACAGTCATCACAAGCTATTCTGAAAGCTCTGAGAGATGAAAATCTGAATGATCCTCGTGAGCGCATTGAAATTGCACAAAGCCATGTTTTCTACAGGCCTTCACTTCTTGGACAACCATGA 1428 0.4167 MVGSIMGMDHNPYSNGSVSVQNCNGVEEKLDGLRRLVGKGDGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKIQIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKHLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAYFLFFFLMLSGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLRPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHVFYRPSLLGQP* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1244 475 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 277 442 IPR008927 -
Apr4g1244 475 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 149 251 IPR011128 GO:0016616|GO:0046168|GO:0051287
Apr4g1244 475 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 475 - -
Apr4g1244 475 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 49 66 IPR006168 GO:0004367|GO:0006072|GO:0009331
Apr4g1244 475 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 270 294 IPR006168 GO:0004367|GO:0006072|GO:0009331
Apr4g1244 475 Gene3D - 28 108 - -
Apr4g1244 475 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 277 IPR036291 -
Apr4g1244 475 Gene3D - 277 447 IPR013328 GO:0016491
Apr4g1244 475 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 277 441 IPR006109 GO:0004367|GO:0005975
Apr4g1244 475 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 475 - -
Apr4g1244 475 Gene3D - 139 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1244 Apr-Chr4 11269125 11273559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1244 1 475 Acyl Lipid Metabolism Gene Families AT2G41540 85.895 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1244 K00006 - gmx:100781512 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1244 4 11269125 11273559 Apr4g1244 4 11269125 11273559 ECH