Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1242 ATGAGTACACATGGTTCTTACAGCATGAGATCCAAAGCATCCTTTGAAAATGAAACCAAGGCCAATGTGAAAGAAAGTGCGGGAGGGAGTGGAGGTAAGGTTGGGAAGGTGATGACTTCCAACAGCAAGGAGAACCTGTTCATATGTTTTCTGGTGACACTTTGGTACTCTTCAAACATTGGTGTGATCCTTCTGAATAAGTACCTGCTTTCAAACTATGGTTTCAAGTTCCCAATCTTTCTCACAATGTGTCACATGTCAGCTTGTGCTGTTCTCAGCTATGTGTCCATTGTGTTCTTCAAGGTGGTGCCTCAGCAGATGATCAAATCAAGGTCTCAGTTCATAAAGATTGCAACTTTGAGCCTTGTCTTTTGTGGGTCTGTGGTGGGTGGCAACATCTCCCTCAGGTACCTGGCTGTGTCATTCAACCAAGCGGTGGGTGCAACCACACCCTTTTTCACTGCTGTGTTTGCCTATTTGGCTACCCTTAAGAGAGAGGCTTGGGTTACCTATGCTGCACTTGTCCCTGTTGTTGCTGGGGTTGTCATTGCAAGTGGGGGTGAGCCAGGATTTCACTTGTTTGGATTCATTATGTGCCTAAGTGCAACCGCTGCAAGGGCTTTCAAGTCTGTCCTCCAAGGCATTTTGCTTTCTTCTGAAGGGGAGAAGCTGAACTCAATGAATTTGCTCCTCTATATGTCTCCAATTGCTATCCTAGTTTTGTTACCTGCAGCGCTTATCATGGAGCCTAATGTTGTTGATGTCACTATATCACTTGGAAAGGAACATAAATCTATGTGGCTACTTCTTTTGCTTAACTCAGTCACAGCATATGCAGCAAACTTAACAAATTTCTTGGTGACTAAACATACTAGTGCTCTTACTCTCCAGGTATTAGGCAATGCAAAAGGTGCTGTAGCCGTTGTAATCTCAATACTCCTATTCAGAAATCCTGTCACTTTTATTGGCATGGCTGGCTATTCGATTACCGTAATGGGAGTAGCAGCATATGGAGAGACAAAAAGGAGGTTTAGATGA 1038 0.4393 MSTHGSYSMRSKASFENETKANVKESAGGSGGKVGKVMTSNSKENLFICFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVLSYVSIVFFKVVPQQMIKSRSQFIKIATLSLVFCGSVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWVTYAALVPVVAGVVIASGGEPGFHLFGFIMCLSATAARAFKSVLQGILLSSEGEKLNSMNLLLYMSPIAILVLLPAALIMEPNVVDVTISLGKEHKSMWLLLLLNSVTAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGMAGYSITVMGVAAYGETKRRFR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1242 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 336 - -
Apr4g1242 345 Pfam Triose-phosphate Transporter family 48 337 IPR004853 -
Apr4g1242 345 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN-RELATED 39 344 - -
Apr4g1242 345 PANTHER SOLUTE CARRIER FAMILY 35 39 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1242 Apr-Chr4 11245291 11250535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1242 39 345 Organic Solute Cotransporters AT5G04160 80.782 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1242 - - gmx:100782949 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1242 4 11245291 11250535 Apr4g1242 4 11245291 11250535 ECH