Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1238 ATGGCTTCTTCTAGCTATGAAAGTTCACCAATGGCTTCTAATTTTTGCAGCCATGAAAAAGTGCTTAGCAATGGAACGTTCCATCCAACACCAGTGGTAGTTGTTGTTGTGCCTTTCCCAGCACAAGGGCATCTGAACCAGCTTCTTCATCTCTCACGCCTCATCATAGCATATAACATACCTGTTCATTTTGTAGGCACACCCACACACAATCGCCAAGCCATAGTTCGTGCACAAGGTTGGGACCCAACTTCTATTTCAAACATTCATATTCATGACTTGAAGGTTCCTCCTTTTGTTTCCCCTTCTCCTAATCCATATGCTCAAACAAAGTTCCCTTCACATCTTTTCCCTTCTTTTGAGGCCTCAACAAGACTTCGTGAACCCGTGGCTTCACTTTTGCAATCTCTTTCATCTAGGGCTAGAAGGGTTGTTGTCATCCATGACTCCCTTATGGCTTATGTGGTGCAAGATGCTATTCGTATACCCAATTGTGAGAGCTACACTTTCCATAGTGTCTCTGCCTTCACCATGTTTTTGTACTTTTGGGATGCAATGGGGAGACCCCAAATAGAAAGTTCTCACATCCCTGAGGTTCCATCTCTTGAAGGGTGTTTCACAACCCAATTCATAGATTTCATCACTTCACAATATGAGTTCCATAAGTTTAGCAATGGAACCATTTACAACACCACAAGGGCAATTGAAAGCCCTTATATGGAGTTAATAGAGAGGATCATTGGTAGCAAGACTCATTGGGCTTTGGGGCCCTTTAACCCTTTGTCCATTGAAAAGGGTGTGTGTGAAGGTAAAAGGCACTTTAGTGTTGAATGGCTTGATAAGCAAGAGCCAAGATCAGTTATGTATGTGTCTTTTGGGACAACCACATGCTTCACTGAGGAACAAATAAAGGAACTTGCAAGTGGGTTGGAACAAAGCAAGCAAAAGTTCATATGGGTAGTGAGAGATGCTGACAAAGGAGATGTGTTCAATGAGGAACATGGAGTGAGAAGTGTTGAACTTCCAAAAGGGTTTGAAGAGAGAGTTGAAGGCATTGGGTTAGTTGTGAGAGATTGGGCGCCCCAATTGGAAATTCTAAGTCACATTTCAACTGGGGGGTTTATGAGTCACTGTGGTTGGAACTCTTGCATGGAAAGCATCACTATGGGAGTGCCAATAGCAGCATGGCCTATGCATTCTGATCAACCTAGGAACAGAGTTTTGGTGACTGAAGTGCTTAAGGTTGGTTTGGTTGTGAAGGATTGGGCCCACAGGGATGAGTTGGTGACAGCATCAGATGTTGAGAATGCTGTGAAGAGGTTGATGGCAACAAAGGAAGGTGGTGAAATGAGACAAAAGGCAAGGAACCTGAAAAATGCCATTCTCAAGTCCGTGGATGAAGGAGGTGTTTCTCGTGTGGAATTGGATTCATTCATTGCCCACGTCACTAGATAG 1455 0.4371 MASSSYESSPMASNFCSHEKVLSNGTFHPTPVVVVVVPFPAQGHLNQLLHLSRLIIAYNIPVHFVGTPTHNRQAIVRAQGWDPTSISNIHIHDLKVPPFVSPSPNPYAQTKFPSHLFPSFEASTRLREPVASLLQSLSSRARRVVVIHDSLMAYVVQDAIRIPNCESYTFHSVSAFTMFLYFWDAMGRPQIESSHIPEVPSLEGCFTTQFIDFITSQYEFHKFSNGTIYNTTRAIESPYMELIERIIGSKTHWALGPFNPLSIEKGVCEGKRHFSVEWLDKQEPRSVMYVSFGTTTCFTEEQIKELASGLEQSKQKFIWVVRDADKGDVFNEEHGVRSVELPKGFEERVEGIGLVVRDWAPQLEILSHISTGGFMSHCGWNSCMESITMGVPIAAWPMHSDQPRNRVLVTEVLKVGLVVKDWAHRDELVTASDVENAVKRLMATKEGGEMRQKARNLKNAILKSVDEGGVSRVELDSFIAHVTR* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1238 484 Gene3D Glycogen Phosphorylase B; 27 272 - -
Apr4g1238 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 34 484 - -
Apr4g1238 484 PANTHER GLYCOSYLTRANSFERASE 28 484 - -
Apr4g1238 484 Gene3D Glycogen Phosphorylase B; 275 466 - -
Apr4g1238 484 ProSitePatterns UDP-glycosyltransferases signature. 359 402 IPR035595 -
Apr4g1238 484 PANTHER GLYCOSYLTRANSFERASE 28 484 - -
Apr4g1238 484 CDD GT1_Gtf-like 38 462 IPR002213 GO:0008194
Apr4g1238 484 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 285 445 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1238 Apr-Chr4 11213421 11215351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1238 34 483 Glycosyltransferase AT2G15490 29.979 5.56e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1238 K13495 K13492 gmx:100799527 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1238 4 11213421 11215351 Apr4g1238 4 11213421 11215351 ECH