Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1235 ATGGTCCACTATCACCGCTCCCATCAACCCAGAAAAGCTGCAACAGAGTCCACCAAAGATGAAGAGTCACAAAACCTTGTCTTGGATTGCTCAAGCTCTAGTTACTACAAGAGAACTAGACCCAAGTTGTTGTCTTTTCTCTTCCTCATCACCTTCCTCTCTTGTTGCTATGTTTTCGCACCCTTTTTCTTTCCCCCTTCTTTCACTTTATCTCTATTATACTCTCCCGGAACTGAAAATGATGGGAACCAAGATGGGGTTGATGCAAATGCTTCTACATGCTCTTCAGTTTCTACTGGAACTATATGTTGTGATAGAAGTGGTTACCGTTCTGATGTTTGTGTGATGAAAGGTGATATAAGAACTCATTCAGCTTCCTCTTCAGTCTTTCTTTACAATTCAGGGAGCATTAATAATGTTTCCAAACATGAAAAGATCAAACCTTATACTCGAAAATGGGAGACAAGTGTTATGGACACTATTGATGAATTAAATCTCATCTCAAAGAAAGTGAATTTGGGTGATGTTGGTGGTTGTGATGTCCAACATGATGTTCCTGCAGTGTTCTTCTCTAATGGGGGCTACACTGGGAATGTTTATCATGAATTCAATGATGGAATCATACCCTTATACATCACTTCCCAGCATTTCAACAAGAGGGTTGTATTTGTAATTCTTGAATATCATAAGTGGTGGATGATGAAGTATGCAGACATCCTCTCTCATCTATCAGATTTTCCAGCAATTGATTTTAAAGAAGACAACAGAACACATTGCTTCCCAGAAGCCATTGTTGGTCTTAGAATCCATGATGAACTCACTGTGGATTCTTCATTGATGAAGGGTAACAAGGGTATTGTTGATTTTAGAAACCTCTTGGATCAAGCTTATAGGCCTAGGATTAAGGGTCTGATTCAAGATGAGGAAAGGAAAGCACAAGAGAAACTGAGAGAACAAGCCTCTTCATCTCCATCATCAGAAACCTCACAAGAAGGTTATATTATTAAGCAACATGTGCAAGAGAATCCATGGAAGAAACCAATGTTGGTTATTCTCTCTAGAAGTGGGTCAAGAGCTATTACTAATGAGAATTTGCTGGTGAAGATGGCAAAAGACATTGGGTTTTTGGTGCAAGTGTTAAAACCTGACAGAACCACAGAATTGGCAAAAATTTACAAGGCACTTAATGCAAGTGATGTCATGATAGGGGTTCATGGAGCAGCTATGACACATTTTCTTTTCTTGAGACCTGGTTCTGTGTTTATTCAAGTGGTTCCTCTCGGTACTACATGGGCAGCACAAACTTATTATGGAGAACCTGCGAGGAAGCTTGGCTTGAAGTACATTGGCTATGACATTCATCCTAGAGAGAGCACTTTATATGGGAAATATGATAAAAATGATCCTATTCTAAGAGACCCTGCAAGCATTAACAAGAAAGGGTGGGAATACACAAAGAAGATCTATCTTGACAGCCAAAATGTCAATCTAGACCTTAGAAGATTCAGAAAAAGGTTGCATCGAGCTTATGAGTACACAGTCTCCAAATCAAAGCTGAATCTTCAACACCAACCAATGTGA 1581 0.3941 MVHYHRSHQPRKAATESTKDEESQNLVLDCSSSSYYKRTRPKLLSFLFLITFLSCCYVFAPFFFPPSFTLSLLYSPGTENDGNQDGVDANASTCSSVSTGTICCDRSGYRSDVCVMKGDIRTHSASSSVFLYNSGSINNVSKHEKIKPYTRKWETSVMDTIDELNLISKKVNLGDVGGCDVQHDVPAVFFSNGGYTGNVYHEFNDGIIPLYITSQHFNKRVVFVILEYHKWWMMKYADILSHLSDFPAIDFKEDNRTHCFPEAIVGLRIHDELTVDSSLMKGNKGIVDFRNLLDQAYRPRIKGLIQDEERKAQEKLREQASSSPSSETSQEGYIIKQHVQENPWKKPMLVILSRSGSRAITNENLLVKMAKDIGFLVQVLKPDRTTELAKIYKALNASDVMIGVHGAAMTHFLFLRPGSVFIQVVPLGTTWAAQTYYGEPARKLGLKYIGYDIHPRESTLYGKYDKNDPILRDPASINKKGWEYTKKIYLDSQNVNLDLRRFRKRLHRAYEYTVSKSKLNLQHQPM* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1235 526 Pfam Glycosyltransferase 61 314 421 IPR007657 GO:0016757
Apr4g1235 526 PANTHER EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE-LIKE 35 518 - -
Apr4g1235 526 MobiDBLite consensus disorder prediction 1 20 - -
Apr4g1235 526 MobiDBLite consensus disorder prediction 318 333 - -
Apr4g1235 526 MobiDBLite consensus disorder prediction 312 333 - -
Apr4g1235 526 PANTHER GLYCOSYLTRANSFERASE 35 518 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1235 Apr-Chr4 11176455 11179116 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1235 - - gmx:100785080 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1235 4 11176455 11179116 Apr4g1235 4 11176455 11179116 ECH