Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1228 ATGAAATTGAAGGAAGTGATTCGCAAAGAACCTACTCTGCTTGTGATGGTCGTTGGTGTTCCTAATGTTGGCAAATCAGCTCTCATCAACTCTATTCATCAAATTGCGCACTCCAGATTTCCTGTGCAGGAAAAGAGGAAGCGTGCTGCTGTGGGTCCATTACCTGGTGTTACTCAAGACATTGCAGGATTCAAGATAGCACATAAACCTAGCATATATGTCCTAGATACCCCAGGGGTTCTGGTTCCTAGTATCTCAGACATAGAGACAGGGTTAAAGCTGGCTCTTGCAGGGGGAGTGAAAGATTCAGTAGTGGGTGAGGAGCGAATTGCTCAGTACTTATTGGCAGTTTTGGATACCCGAGGGACGCCACTTCACTGGAAGCTCCTAAATAACAGGAGAATAAATGGGATTGAATGTGAAGCTGAGGAAAATCATGAATATAGTCTGAAAAATCTTAAGTCAAAGAGAAGAAATTTACCAAATAGATGTGACTTGGTATATGCTGAGGATATTGTAACGGAAGTTCAGCATGCGCTCTATTCAACTCTCTCAGAATTTAATGGGAATGTAGAAGATGAGAATGACTTAGAGCGCCTTATTGACCTGCAATTTGGTGCACTACAGAAGGCATTAAAGATACCTCACAAGGCCTCAGAAGCGCGGTTAATAGTTCCTTACTCTATTCAGGACTGGTAA 699 0.4263 MKLKEVIRKEPTLLVMVVGVPNVGKSALINSIHQIAHSRFPVQEKRKRAAVGPLPGVTQDIAGFKIAHKPSIYVLDTPGVLVPSISDIETGLKLALAGGVKDSVVGEERIAQYLLAVLDTRGTPLHWKLLNNRRINGIECEAEENHEYSLKNLKSKRRNLPNRCDLVYAEDIVTEVQHALYSTLSEFNGNVEDENDLERLIDLQFGALQKALKIPHKASEARLIVPYSIQDW* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1228 232 Gene3D - 1 84 IPR027417 -
Apr4g1228 232 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 1 225 - -
Apr4g1228 232 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 1 225 - -
Apr4g1228 232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 97 IPR027417 -
Apr4g1228 232 Pfam 50S ribosome-binding GTPase 15 132 IPR006073 GO:0005525
Apr4g1228 232 Gene3D - 86 210 IPR023179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1228 Apr-Chr4 10990358 10994185 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1228 K19828 - gmx:100801130 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1228 4 10990358 10994185 Apr4g1228 4 10990358 10994185 ECH