Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1216 ATGGCGTGCAATGGCTCCGGTTGCGAGTCCGGTTGTTACAAAGACGAAGAAGCAATGTGTAACCAACCAACAAAGTCTGCAGAAACCGATTCGACGAGCCCTAGCAAGATCTGTATCAAGTGCAAACTTAACGACGCCGTTTCCGGCTATGGCGGAATCGACGACGGCCGTTTCTGCGCCGATTGCTTCAAGAGCAACTTGTTCGGAAAGTTTCGTATCGCCGTAACTTCAAACGCCATGATTACTCCCACTGATAAGGTCCTCGTTGCCTTCTCAGGTGGCTCTTGTTCTAGGGTAGCCTTGCAATTTATGCATGACATGCAAGCGAGGGCCCAGAAGAACTTTGATGCGAGTAGAGATAGGTCATTGCCCGTTTTTGGTGTTGGAGTTGTGTTTATTGATGAGAGTTCTGTTTTGCCAATTCCTTCTAATGAAATGGAGGAAGCAGTTGTAGTTATTAATAAGGTTGTGTCGAGTTTAGCCCCGCCTAGAAAGGAGTTGCATGTTGTTCCTATTGAGACTGTTTACTCGACTGATTCTAGTGATGGAAAGGAGAGGCTAATCAAGCTAGTGAATGCGGTGAGTGATCCGACCGGAAGGGAGGATATGCTGCTTTGTTTGCGAATGTTGGCCCTGCAAAAGGTTGCTTCTGAATTCGGGTATAACAGAATCGTATTAGGATCATGCATCTCAAAGATTGCTTGCCATGTCATTTCAGCTACTGTGAAGGGCCAAGGATATTCATTACCTGCTGATATACAGTATGTTGATGCTAGATGGGACATTCCTGTTGTGCTTCCTCTGCGTGATTGTTTTGCCCAAGAGATCAACATGCTTTGCCACCTTGACGGTCTAAAGACTTTAGCGTTATCTACGGGTCCATGCTCTAGCATTAATGGCTTAGTCTCATCTTTTGTGGCTCTTTTACAGGAAGAAAACCCATCTCGAGAGAGCACAATCGTAAGAACGGCCAGTAAACTGACTCCCTTCCAATTCAACCGGATTCCAGAGATAATTGATGGTAATGTTCCCTTGGCAACTCGAAGACGCCAGAAGAGATATAATATCAAATCCGATGAATCTGTTTCCTCCGAATCTTTCTGTTCTCTCTGCAACAGCCCACTTGACAAGAGTGAGATTGTTGAATGGAGCAATCTTGATAACTGCAGAAGTAGTGACATTTTTTACACTGCCTGCTGTTCAAGTTGTCAGTTTCAGATACTTCCAAAGGATTCCATGTTAGTGGAACAATTTTATGTGGATTTACCTCAATCGGTGGTTGCCCGAGTGAAGCAAGCCAACAATGGTAACTTGAGTCGGCTAAGGGAACAAATACAAGATTGCCTGCTTTCAGATGGTGAAGATGAAACATAG 1374 0.4476 MACNGSGCESGCYKDEEAMCNQPTKSAETDSTSPSKICIKCKLNDAVSGYGGIDDGRFCADCFKSNLFGKFRIAVTSNAMITPTDKVLVAFSGGSCSRVALQFMHDMQARAQKNFDASRDRSLPVFGVGVVFIDESSVLPIPSNEMEEAVVVINKVVSSLAPPRKELHVVPIETVYSTDSSDGKERLIKLVNAVSDPTGREDMLLCLRMLALQKVASEFGYNRIVLGSCISKIACHVISATVKGQGYSLPADIQYVDARWDIPVVLPLRDCFAQEINMLCHLDGLKTLALSTGPCSSINGLVSSFVALLQEENPSRESTIVRTASKLTPFQFNRIPEIIDGNVPLATRRRQKRYNIKSDESVSSESFCSLCNSPLDKSEIVEWSNLDNCRSSDIFYTACCSSCQFQILPKDSMLVEQFYVDLPQSVVARVKQANNGNLSRLREQIQDCLLSDGEDET* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1216 457 Hamap Cytoplasmic tRNA 2-thiolation protein 2 [CTU2]. 32 411 IPR019407 GO:0000049|GO:0002098|GO:0034227
Apr4g1216 457 Gene3D HUPs 37 399 IPR014729 -
Apr4g1216 457 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 287 - -
Apr4g1216 457 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 23 451 IPR019407 GO:0000049|GO:0002098|GO:0034227
Apr4g1216 457 Pfam Cytoplasmic tRNA 2-thiolation protein 2 297 384 IPR019407 GO:0000049|GO:0002098|GO:0034227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1216 K14169 - gmx:100804325 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1216 4 10768407 10772489 Apr4g1216 4 10768407 10772489 ECH