Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1209 ATGGGCAAATCATTTGTCTTCGATATCGCTGAATCACTGCTAACGAAGCTTGCTTCTCAGGCTTATGAAGAAGCTTCTCTAGCCTATGGTGTCTATGAAGATTTGCATGCGATCAAAGACACTTTGTCAATAGTCAAAGGTGTGCTATTGGATGCTGAGGATAAGAAGGAGCATAATCATGCCTTGCGTGAATGGCTGAGGCAGATTCAAAACGTATGCTCTGATGCTGAAGATGTTTTGGATGGATTTAAGTGTCAAACATTGCGAAAGCAAGTTGTCAATGCTTCTGGCAGCATAAGGATGAAGGTAGGACACTTCTTTTCTCCATCTAATCCTCTCGTTTTCCGTCTTAGGATGGCTCATCAAATCAAAGATGTTAGGGACAGATTGGATAAGGTTGTTGCTGACGGGAACAAGTTTGCTCTTGAGAGGGTTGATGTTGACCAAAGACTTGTAGTGCAAAGGAGGGAAATGACTTATTCCCATGTTGATGCTTCAGATGTGATAGGAAGGGAGAATGATAGGGAGGAAATTTTCAAGCTTTTGATGCAACCTCTCCCTGATGGTGGTGGTGATAAAAGCCTGTGTGTTATTCCCATAGTGGGTATTGGAGGCTTGGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGGGTAGATGAAGTTTTCCAATTGAAGATGTGGGTCTGTGTCTCTGATGATTTTGATATTAGGCAGATAATTATTAAGATCATCAACTCTGCTTCTTCCTCTACTTCAGCTTCAGCTCCAAATATTGCTAATGCTCATCATGAAGACATTAACAACTTAGATATGGAGCAGCTACAGAGTCGTCTGAGATGTAAGCTTTCTGGTCAGAGGTTTTTGCTTGTGTTAGATGATATATGGAATGATGATTATGCAAAATGGGTAGAGTTGAAAAGTTTAATAAATGTTGGCGCAGTAGGAAGCAAAATATTAGTGACAACACGGAGTAACTCAATTGCTTCAATGATGGGCACTGTTTCCTCGTATGTTTTAGAAGGCCTTTCTCTGGAGCATTGTTTGTGTCTGTTTGTCAAATGGGCATTCAAGGAAGGTGAAGAAAAGAAACATCCAAATTTAGTGGAGATCGGAAAAGAAATTGTGAAAAAATGCCGAGGAGTTCCACTAGCAGTGAGAACCTTAGGAAGTTCACTGTTTTTAACTTTTGATTTAGAAAAGTGGGAATTTGTGAGGGACCATGAGATATGA 1239 0.4052 MGKSFVFDIAESLLTKLASQAYEEASLAYGVYEDLHAIKDTLSIVKGVLLDAEDKKEHNHALREWLRQIQNVCSDAEDVLDGFKCQTLRKQVVNASGSIRMKVGHFFSPSNPLVFRLRMAHQIKDVRDRLDKVVADGNKFALERVDVDQRLVVQRREMTYSHVDASDVIGRENDREEIFKLLMQPLPDGGGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRVDEVFQLKMWVCVSDDFDIRQIIIKIINSASSSTSASAPNIANAHHEDINNLDMEQLQSRLRCKLSGQRFLLVLDDIWNDDYAKWVELKSLINVGAVGSKILVTTRSNSIASMMGTVSSYVLEGLSLEHCLCLFVKWAFKEGEEKKHPNLVEIGKEIVKKCRGVPLAVRTLGSSLFLTFDLEKWEFVRDHEI* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1209 412 Gene3D - 10 124 - -
Apr4g1209 412 Gene3D - 344 410 IPR042197 -
Apr4g1209 412 CDD RX-CC_like 12 133 IPR038005 -
Apr4g1209 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 410 IPR027417 -
Apr4g1209 412 Pfam Rx N-terminal domain 11 94 IPR041118 -
Apr4g1209 412 Pfam NB-ARC domain 190 408 IPR002182 GO:0043531
Apr4g1209 412 PRINTS Disease resistance protein signature 197 212 - -
Apr4g1209 412 PRINTS Disease resistance protein signature 284 298 - -
Apr4g1209 412 PRINTS Disease resistance protein signature 381 395 - -
Apr4g1209 412 PANTHER OS08G0543100 PROTEIN 27 405 - -
Apr4g1209 412 PANTHER DISEASE RESISTANCE PROTEIN RP 27 405 IPR044974 GO:0006952
Apr4g1209 412 Gene3D - 150 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1209 Apr-Chr4 10687920 10691512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1209 - - gmx:100796004 627.476