Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1183 ATGAAAGAAACTGAGAAGAGAAAAGCTTCAAGGAATAGTCAGACAAAGGGTTCAAGAAGAACCGAAAGGAGAGAGAATAAATTGCATCAAGATAATTCTTCCAAAATATTGAATGAAAAAGGAACTGAACCTAAGACACCCCAGGATAGTAGACCAACTGCAAATAATTTTATGAGTGATTCAAACACAGTCTCAGAGAATTCGGAAACTTATGAAAACGTGGTTATACATTATGTGGATGATGTCAACAGGTCTGAGGAGGCACTTGTCAAGATGAAAGTTAATGAAACGGCTGCTAATGAAAACAAAAATGAAGTAGCTGATGATCATTCCAGTGATTTGGAGAAAGAGCAAAAGGAAGTGAATGAAGAACTATCTGATACTGAGACAGTAAAGGATTCTGTATCTTCCCAAGGTGATTCTTTCACAAATGAGAATGAGAAAGTAGAAAAAGCTGCAAAAGATCCTAAAAGTAAGGTTAAAGTGAATCCTTCAGAAAGCAATCGTGGATCTCGGGAGAGATCTGATGGAAAAGGAAATAAATTGCAATCAAAGGTATCTGATAGCAATCAAAAGAAGCCAATGAACTCAAATAAAGGACCCTCCAAAGTTTCAAACAAAAATGCTTCAACCAATTCTAAGACTGTTAAAGTTCCTGTAAATGTTTCGTCTGAATCTTCTGAAGGTGTTGATGAAAAACCTGTTCCAGAGGTCAAGGAACTTGATATCCTGGATGGATCCTCCAATGGTGCACAGAGTGTGGGAAGTGAAGATGAAAGTCATGAAACCATTAATGCTGAAGAAAATGGTGAACATGAGGACGAGACAGGTTTGGAAATAAAAATTGAAGAAATGGAATTACGAATTGAAAAGCTTGAAGAGGAACTGAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTGTTGTACCAGAGCATGGTAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCCAGGCTGTATATACATGCTTGTAAGCACTGGAGCCAAAACAGGCGAGCAATAATTGCCAGGAATACTGTTTCTGGCCTTATTTTGGTTGCGAAGTCTTGTGGTAATGATGTTTCAAGGCTAACTTTCTGGTTGTCAAATACCACTGTGCTGAGAGAGATAATTACTCAGGCTTTTGGAAATTCATGTCAACCTAGTCCCCTTAAAAGGTTGGCTGAGTCAAATGGGGCCAGCATGCGAAATGATGGGAAGTCTGCGGCATTGAAATGGAAGGGTAGCTCCAACGGTAAACCAGGAAATGGTTTTATGTCTCTTGTTGAAGATTGGCAAGAGACAGGAACCTTTACCTCTGCTCTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCCATATGCAGTCTCCAGTTGGGGACTCTTCTTCTAATAAACCCATTGGGAGACTGCTGGGACCTGCTTTGGGTGATCACAATCAAGGAAACTTTTCCATCAATCTCTGGAGAAATGCTTTCCAAGATGCTTTTCAACGACTCTGTCCTGTTCGAGCAGGAGGGCATGAGTGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTTATGGAACAGTGCATTGCAAGACTAGATGTTGCTATGTTCAATGCGATTCTTCGGGAGTCAGCCCTTGAGATCCCAACTGATCCTATATCAGATCCTATTGTAGATTCAAAGGTTTTGCCAATTCCAGCAGGAGATTTAAGCTTTGGGTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGACGCTGAAGACAGTCTACATGAAGATCAAGAGAACAGTGAGAATAATGAAAGGCAGGGTGGAGATGGTGAACCTAAATCTTTTGTTCTCCTTAATGACTTGAGTGACCTTCTGATGCTCCCTAAAGACATGCTTATAGATACAAAAATCAGACAGGAGGTGTGTCCATCCATCAGTCTTTCATTGATTATACGTGTTCTTTGTAACTTCACTCCAGATGAGTTCTGTCCAGACCCTGTTCCAGGAGCTGTCTTGGAGGCCTTAAATGGGGAGACTATTGTGGAGAGAAGATTATCGGCGGAATCTATAAGAAGCTTCCCCTATGTGGCTGCTCCGGTTGTGTATACACCTCCCTCTTCAGCTAATGTGGCAGAGAAAGTTGCAGAGGCAGGAGGAAAGTCTCACTTGGGAAGGAATGTATCAGCTGTTCAAAGGAGAGGATACACAAGTGATGAAGAGCTAGAGGAACTTGATTCCCCTCTCACATCCATCGTTGATAAAATGCCTTCATCTCCAACAATCTCTGATAATGGAAAAGGTAACCACAAAGAGCAAGGAAACCCCCCCATAACAAATGCTAGATATCAACTCTTACGTGAAGTTTGGTCCATGTGA 2433 0.4188 MKETEKRKASRNSQTKGSRRTERRENKLHQDNSSKILNEKGTEPKTPQDSRPTANNFMSDSNTVSENSETYENVVIHYVDDVNRSEEALVKMKVNETAANENKNEVADDHSSDLEKEQKEVNEELSDTETVKDSVSSQGDSFTNENEKVEKAAKDPKSKVKVNPSESNRGSRERSDGKGNKLQSKVSDSNQKKPMNSNKGPSKVSNKNASTNSKTVKVPVNVSSESSEGVDEKPVPEVKELDILDGSSNGAQSVGSEDESHETINAEENGEHEDETGLEIKIEEMELRIEKLEEELREVAALEVSLYSVVPEHGSSAHKVHTPARRLSRLYIHACKHWSQNRRAIIARNTVSGLILVAKSCGNDVSRLTFWLSNTTVLREIITQAFGNSCQPSPLKRLAESNGASMRNDGKSAALKWKGSSNGKPGNGFMSLVEDWQETGTFTSALERVESWIFSRIVESVWWQALTPHMQSPVGDSSSNKPIGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDAEDSLHEDQENSENNERQGGDGEPKSFVLLNDLSDLLMLPKDMLIDTKIRQEVCPSISLSLIIRVLCNFTPDEFCPDPVPGAVLEALNGETIVERRLSAESIRSFPYVAAPVVYTPPSSANVAEKVAEAGGKSHLGRNVSAVQRRGYTSDEELEELDSPLTSIVDKMPSSPTISDNGKGNHKEQGNPPITNARYQLLREVWSM* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1183 810 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 11 809 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 611 627 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 47 70 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 769 798 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 182 228 - -
Apr4g1183 810 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 809 IPR021827 GO:0005643
Apr4g1183 810 Coils Coil 100 131 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 93 277 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 1 70 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 611 631 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 260 277 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 1 46 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 102 130 - -
Apr4g1183 810 Coils Coil 275 302 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 144 181 - -
Apr4g1183 810 MobiDBLite consensus disorder prediction 770 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1183 Apr-Chr4 10289122 10295686 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1183 - - gmx:100804499 1357.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1183 4 10289122 10295686 Apr4g1183 4 10289122 10295686 ECH