Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1181 ATGGCAACAAGATGGAAAGGAAAAGATATGAAAGCTAAAAAGGATGCAGAAGCTGAAGCACTTAAGGAACCGATGTCAAAAATTATATCTCAACTTCAATCTTCTCTAGTTCAATCAGATACTTGTGGATTTCTCTCTGATAACAGTGTACACTTAGCAGTGGGAGCAGAACAAATTGAACTGCTTGATAAAGCATGCTTTGGTCGACCAGTGAGAACAGTTGAAAAGGACAAACAATGGTTTCAATTAAGCTTTGAGGAAGCATTCTACCTAATATATTCCTTGAAATGCCTTAAGATTAATGGCAGTGATACTAGTTCTCAAAATAATAAAGAGTTATGGCATTACATGAAGTGCAAGAAAGAAACATTCCCTTGTTTCTACAAGGCTTATTCACATCTTCGAATGAAAAATTGGGTAGTGAGATCAGGAGGTCAGTATGGTGTAGACTTCATTGTCTATCGTCATCATCCAACTCGGGTTCATTCTGAGTATGGTGTGCTTGTTATGTGTGATGAGGATGATAAAGATCTGAATGGAAGATTGAGAGTATGGTCTGATGTTCATTGTACAACAAGACTTCTTGGAAGTGTAGCAAAAATCTTATTGGTTATACATGTCATGAAAAATGGTAATAGTGATGATTCTCCATCGTGTTTGTCAAACTATACCATTGAAGAGTGCACAATCACCAGATGGAGTCCTGAACAATGCCGTGAAAAATGTAGTTCATGTTAA 738 0.3686 MATRWKGKDMKAKKDAEAEALKEPMSKIISQLQSSLVQSDTCGFLSDNSVHLAVGAEQIELLDKACFGRPVRTVEKDKQWFQLSFEEAFYLIYSLKCLKINGSDTSSQNNKELWHYMKCKKETFPCFYKAYSHLRMKNWVVRSGGQYGVDFIVYRHHPTRVHSEYGVLVMCDEDDKDLNGRLRVWSDVHCTTRLLGSVAKILLVIHVMKNGNSDDSPSCLSNYTIEECTITRWSPEQCREKCSSC* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1181 245 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 1 243 IPR006676 GO:0000213|GO:0006388
Apr4g1181 245 Gene3D - 123 220 IPR011856 GO:0003676
Apr4g1181 245 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 123 212 IPR036167 GO:0006388
Apr4g1181 245 Pfam tRNA intron endonuclease, N-terminal domain 43 114 IPR006678 GO:0000213|GO:0006388
Apr4g1181 245 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2-1-LIKE 1 243 - -
Apr4g1181 245 Pfam tRNA intron endonuclease, catalytic C-terminal domain 128 212 IPR006677 GO:0000213|GO:0006388
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1181 Apr-Chr4 10272054 10274162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1181 K15322 - gmx:100810335 392.889