Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1172 ATGGGAGCCACGTTTACGTTCGGATTATGCTTCCTCTTATTCTCTGGACTCGCATTCTCGGACTGTCCACACGACAAGAAAGTGCTTCTCCAAATAAGGAAGGACTTGAACAACCCTTACCTCCTAGCCTCGTGGGACCCTGACACCGATTGCTGCGACTGGTGCTGCGTCAAATGCGACTCCAAAACGCACCGCATCTACTCCCTCGTGATGTTATCTTCTGTGCCAGATACCAATTTATCAGGCCACATACCACCCTCCGTTGGAGACCTCCCTTACCTTGAGACCCTCGAATTTCACAAACTCCGTAAACTCACCGGCCCAATTCAGCCCACCATCGCCAAGCTCACCAAACTCAAGTACCTCACTATCAGCTGGACCAACACCTCCGGCCCAGTTCCAAATTTCTTGGCCCAACTCACAAACCTGGACTTCATCGACCTTTCTTTTAATAACCTCTCCGGCACCATACCTACCTCACTTTCCCGCTTGCAAAACCTTTCGTTCTTACGCTTGGACCGGAACAAGCTCACAGGCCCAATCCCAGACTCATTTGGGTCATTCAAGAAGCCAGGCCCAAGTATTATCTTATCCCATAATCAACTTTCCGGGCCCATTCCAGCCTCCTTGGGCAACTTAGACCCACAAAGGATAGACTTTTCAAGGAACAAGCTGGAAGGTGATGCCTCCGGGCTTTTCGGGCGGAACAAAACGACGCAGTTTCTTGATGGTTCGAGGAACTTGTTGAAATTTGATTTATCCAAAGTGGAGTTCGCGACGAGCTTGATATCGTTGGATCTGAATCATAACAAGATCTATGGCAGCATTCCCGTGGGATTGACCGCAGTGGATTTTTTGCAGGGGTTCAACGTCAGCTATAATCAGCTGTGTGGTGAGACACCGCAGGGTGGAAGATTGCAAAGGTTCGATGTGTATTCGTATTTTCACAATAAGTGTTTGTGTGGGGCCCCACTTCCTAGCTGCAGTGAACTAAAAATATGA 1002 0.489 MGATFTFGLCFLLFSGLAFSDCPHDKKVLLQIRKDLNNPYLLASWDPDTDCCDWCCVKCDSKTHRIYSLVMLSSVPDTNLSGHIPPSVGDLPYLETLEFHKLRKLTGPIQPTIAKLTKLKYLTISWTNTSGPVPNFLAQLTNLDFIDLSFNNLSGTIPTSLSRLQNLSFLRLDRNKLTGPIPDSFGSFKKPGPSIILSHNQLSGPIPASLGNLDPQRIDFSRNKLEGDASGLFGRNKTTQFLDGSRNLLKFDLSKVEFATSLISLDLNHNKIYGSIPVGLTAVDFLQGFNVSYNQLCGETPQGGRLQRFDVYSYFHNKCLCGAPLPSCSELKI* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1172 333 PANTHER POLYGALACTURONASE INHIBITOR 1 11 330 - -
Apr4g1172 333 SUPERFAMILY L domain-like 27 327 - -
Apr4g1172 333 Gene3D Ribonuclease Inhibitor 22 329 IPR032675 -
Apr4g1172 333 PANTHER POLYGALACTURONASE INHIBITOR 2 11 330 - -
Apr4g1172 333 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1172 Apr-Chr4 10110395 10111450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1172 9 325 Receptor kinase-like Gene Family AT1G12460 29.609 1.44e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1172 - - aprc:113862147 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1172 4 10110395 10111450 Apr4g1172 4 10110395 10111450 ECH